Details for gene set VERHAAK_MES

Table: GSEA Results Summary

Dataset	ranaseq_carol_ns_sel_exprs.ranaseq_carol_ns_sel_phenotype.cls #Fosl1_1_versus_Ctrl
Phenotype	ranaseq_carol_ns_sel_phenotype.cls#Fosl1_1_versus_Ctrl
Upregulated in class	Ctrl
GeneSet	VERHAAK_MES_2010
Enrichment Score (ES)	-0.68724936
Normalized Enrichment Score (NES)	-2.217797
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LOX	LOX	30	5.000	0.0269	No
2	LCP2	LCP2	996	1.476	-0.0086	No
3	LAIR1	LAIR1	1155	1.331	-0.0083	No
4	ALDH3B1	ALDH3B1	1256	1.250	-0.0058	No
5	MAFB	MAFB	1259	1.248	0.0012	No
6	IGFBP6	IGFBP6	2499	0.706	-0.0511	No
7	PTPN6	PTPN6	2976	0.632	-0.0692	No
8	COL1A1	COL1A1	3080	0.631	-0.0703	No
9	LAPTM5	LAPTM5	3093	0.631	-0.0673	No
10	UCP2	UCP2	3368	0.602	-0.0763	No
11	COL1A2	COL1A2	3781	0.602	-0.0916	No
12	RBKS	RBKS	4453	0.527	-0.1192	No
13	PIGP	PIGP	5040	0.415	-0.1434	No
14	LGALS3	LGALS3	5240	0.386	-0.1503	No
15	TRADD	TRADD	6445	0.240	-0.2036	No
16	STXBP2	STXBP2	7022	0.189	-0.2287	No
17	MAN2B1	MAN2B1	7062	0.184	-0.2295	No
18	RABGAP1L	RABGAP1L	7457	0.151	-0.2465	No
19	TNFAIP8	TNFAIP8	7743	0.135	-0.2587	No
20	NPC2	NPC2	8485	0.088	-0.2919	No
21	IFI30	IFI30	9607	0.012	-0.3427	No
22	ITGB2	ITGB2	9864	0.006	-0.3543	No
23	C5AR1	C5AR1	10100	0.000	-0.3650	No
24	COL8A2	COL8A2	10227	0.000	-0.3707	No
25	CD4	CD4	10958	0.000	-0.4039	No
26	MSR1	MSR1	11003	0.000	-0.4059	No
27	PTPRC	PTPRC	11038	0.000	-0.4075	No
28	NCF2	NCF2	11043	0.000	-0.4076	No
29	KYNU	KYNU	11054	0.000	-0.4081	No
30	CDCP1	CDCP1	11299	0.000	-0.4192	No
31	PTPN22	PTPN22	13036	-0.001	-0.4980	No
32	RAB27A	RAB27A	13040	-0.001	-0.4982	No
33	SFT2D2	SFT2D2	13263	-0.007	-0.5082	No
34	YAP1	YAP1	14086	-0.066	-0.5452	No
35	ACSL1	ACSL1	14132	-0.069	-0.5468	No
36	CTSB	CTSB	14332	-0.083	-0.5554	No
37	CTSC	CTSC	14598	-0.104	-0.5669	No
38	FNDC3B	FNDC3B	14667	-0.110	-0.5693	No
39	BLVRB	BLVRB	14676	-0.110	-0.5691	No
40	RRAS	RRAS	14715	-0.113	-0.5702	No
41	STAB1	STAB1	14890	-0.125	-0.5774	No
42	TRPM2	TRPM2	15024	-0.134	-0.5827	No
43	MFSD1	MFSD1	15089	-0.138	-0.5848	No
44	CD2AP	CD2AP	15447	-0.174	-0.6000	No
45	ASL	ASL	15449	-0.174	-0.5991	No
46	HEXB	HEXB	15468	-0.176	-0.5989	No
47	HEXA	HEXA	15571	-0.187	-0.6025	No
48	NRP1	NRP1	15730	-0.203	-0.6085	No
49	MGAT1	MGAT1	15777	-0.209	-0.6094	No
50	DOK3	DOK3	15815	-0.214	-0.6099	No
51	LRRFIP1	LRRFIP1	16039	-0.236	-0.6187	No
52	CYBRD1	CYBRD1	16148	-0.250	-0.6222	No
53	ADAM12	ADAM12	16180	-0.253	-0.6222	No
54	RHOG	RHOG	16445	-0.289	-0.6325	No
55	SCPEP1	SCPEP1	16549	-0.304	-0.6355	No
56	FURIN	FURIN	16598	-0.312	-0.6359	No
57	POLD4	POLD4	16757	-0.339	-0.6412	No
58	DAB2	DAB2	16900	-0.363	-0.6456	No
59	AMPD3	AMPD3	16924	-0.367	-0.6445	No
60	RAB32	RAB32	17001	-0.381	-0.6459	No
61	CASP4	CASP4	17038	-0.388	-0.6453	No
62	WWTR1	WWTR1	17052	-0.391	-0.6437	No
63	CTSZ	CTSZ	17070	-0.396	-0.6422	No
64	GRN	GRN	17155	-0.410	-0.6437	No
65	CD14	CD14	17206	-0.418	-0.6436	No
66	SWAP70	SWAP70	17269	-0.432	-0.6440	No
67	TNFRSF1A	TNFRSF1A	17424	-0.466	-0.6484	No
68	PDPN	PDPN	17456	-0.474	-0.6471	No
69	UAP1	UAP1	17461	-0.475	-0.6446	No
70	IL15RA	IL15RA	17477	-0.480	-0.6426	No
71	EFEMP2	EFEMP2	17509	-0.488	-0.6412	No
72	PLS3	PLS3	17576	-0.509	-0.6413	No
73	RELB	RELB	17618	-0.519	-0.6403	No
74	RBMS1	RBMS1	17694	-0.542	-0.6406	No
75	DCBLD2	DCBLD2	17717	-0.553	-0.6385	No
76	SYNGR2	SYNGR2	17814	-0.588	-0.6395	No
77	LTBP2	LTBP2	17845	-0.599	-0.6375	No
78	SLC11A1	SLC11A1	17892	-0.599	-0.6362	No
79	TNFRSF11A	TNFRSF11A	17893	-0.599	-0.6328	No
80	ENG	ENG	17895	-0.599	-0.6295	No
81	ST14	ST14	17933	-0.599	-0.6278	No
82	THBD	THBD	18075	-0.599	-0.6308	No
83	LCP1	LCP1	18434	-0.602	-0.6437	No
84	VDR	VDR	18436	-0.602	-0.6403	No
85	SLAMF8	SLAMF8	18548	-0.602	-0.6420	No
86	NOD2	NOD2	19546	-0.668	-0.6835	Yes
87	HFE	HFE	19618	-0.685	-0.6828	Yes
88	WIPF1	WIPF1	19674	-0.694	-0.6814	Yes
89	ARPC1B	ARPC1B	19689	-0.703	-0.6781	Yes
90	STAT6	STAT6	19726	-0.709	-0.6757	Yes
91	TNFAIP3	TNFAIP3	19849	-0.737	-0.6771	Yes
92	PYGL	PYGL	19872	-0.749	-0.6739	Yes
93	IQGAP1	IQGAP1	19893	-0.763	-0.6705	Yes
94	TMBIM1	TMBIM1	19899	-0.767	-0.6664	Yes
95	SAT1	SAT1	19925	-0.782	-0.6631	Yes
96	MAN2A1	MAN2A1	19935	-0.788	-0.6590	Yes
97	CNN2	CNN2	20029	-0.843	-0.6585	Yes
98	MYH9	MYH9	20066	-0.867	-0.6552	Yes
99	CASP1	CASP1	20087	-0.882	-0.6512	Yes
100	MVP	MVP	20100	-0.891	-0.6467	Yes
101	CLIC1	CLIC1	20133	-0.913	-0.6430	Yes
102	COL5A1	COL5A1	20235	-0.973	-0.6421	Yes
103	SH2B3	SH2B3	20275	-0.993	-0.6382	Yes
104	TCIRG1	TCIRG1	20284	-0.999	-0.6330	Yes
105	LAMB1	LAMB1	20326	-1.032	-0.6290	Yes
106	S100A13	S100A13	20327	-1.032	-0.6232	Yes
107	DSE	DSE	20365	-1.054	-0.6189	Yes
108	FHOD1	FHOD1	20377	-1.064	-0.6134	Yes
109	IL1R1	IL1R1	20381	-1.069	-0.6075	Yes
110	THBS1	THBS1	20398	-1.082	-0.6021	Yes
111	SHC1	SHC1	20429	-1.093	-0.5973	Yes
112	RAB11FIP1	RAB11FIP1	20451	-1.106	-0.5920	Yes
113	ITGA4	ITGA4	20454	-1.109	-0.5858	Yes
114	LGALS1	LGALS1	20466	-1.122	-0.5800	Yes
115	SRPX2	SRPX2	20520	-1.157	-0.5759	Yes
116	SEC24D	SEC24D	20530	-1.165	-0.5697	Yes
117	ARHGAP29	ARHGAP29	20552	-1.183	-0.5640	Yes
118	LY96	LY96	20565	-1.199	-0.5577	Yes
119	CEBPB	CEBPB	20573	-1.206	-0.5512	Yes
120	FES	FES	20586	-1.212	-0.5450	Yes
121	GCNT1	GCNT1	20662	-1.275	-0.5412	Yes
122	TGFBR2	TGFBR2	20664	-1.278	-0.5340	Yes
123	LHFPL2	LHFPL2	20705	-1.318	-0.5284	Yes
124	TLR2	TLR2	20717	-1.327	-0.5214	Yes
125	SLC10A3	SLC10A3	20759	-1.355	-0.5156	Yes
126	COPZ2	COPZ2	20809	-1.400	-0.5099	Yes
127	MRC2	MRC2	20811	-1.403	-0.5020	Yes
128	ELF4	ELF4	20859	-1.446	-0.4960	Yes
129	CLCF1	CLCF1	20884	-1.464	-0.4888	Yes
130	S100A4	S100A4	20916	-1.503	-0.4817	Yes
131	MAPK13	MAPK13	20937	-1.528	-0.4740	Yes
132	LTBP1	LTBP1	20977	-1.582	-0.4668	Yes
133	ITGA5	ITGA5	20995	-1.615	-0.4585	Yes
134	TIMP1	TIMP1	21019	-1.640	-0.4503	Yes
135	ANXA2	ANXA2	21058	-1.695	-0.4424	Yes
136	PLK3	PLK3	21195	-1.870	-0.4381	Yes
137	ANXA4	ANXA4	21241	-1.930	-0.4292	Yes
138	TES	TES	21253	-1.957	-0.4186	Yes
139	PTGER4	PTGER4	21314	-2.033	-0.4099	Yes
140	EHD2	EHD2	21320	-2.040	-0.3986	Yes
141	VAMP5	VAMP5	21364	-2.131	-0.3885	Yes
142	TEC	TEC	21379	-2.148	-0.3770	Yes
143	FMNL1	FMNL1	21401	-2.152	-0.3658	Yes
144	SERPINE1	SERPINE1	21444	-2.262	-0.3550	Yes
145	EMP3	EMP3	21469	-2.325	-0.3429	Yes
146	ANXA1	ANXA1	21470	-2.327	-0.3298	Yes
147	TNFRSF1B	TNFRSF1B	21500	-2.419	-0.3174	Yes
148	SP100	SP100	21502	-2.423	-0.3038	Yes
149	S100A11	S100A11	21526	-2.486	-0.2908	Yes
150	CASP8	CASP8	21535	-2.525	-0.2769	Yes
151	FXYD5	FXYD5	21552	-2.588	-0.2630	Yes
152	SLC16A3	SLC16A3	21618	-2.631	-0.2511	Yes
153	RUNX2	RUNX2	21631	-2.689	-0.2365	Yes
154	LY75	LY75	21641	-2.728	-0.2215	Yes
155	FHL2	FHL2	21662	-2.802	-0.2066	Yes
156	ARSJ	ARSJ	21688	-2.868	-0.1915	Yes
157	ACPP	ACPP	21734	-2.991	-0.1767	Yes
158	TGFBI	TGFBI	21757	-3.092	-0.1602	Yes
159	TLR4	TLR4	21764	-3.155	-0.1427	Yes
160	CAST	CAST	21765	-3.156	-0.1248	Yes
161	P4HA2	P4HA2	21767	-3.184	-0.1069	Yes
162	PLAU	PLAU	21807	-3.644	-0.0881	Yes
163	PROCR	PROCR	21818	-3.729	-0.0675	Yes
164	PLAUR	PLAUR	21880	-4.804	-0.0431	Yes
165	BNC2	BNC2	21985	-5.000	-0.0196	Yes
166	MGST2	MGST2	22069	-5.000	0.0049	Yes