Details for gene set SCHMITT_TNF

Table: GSEA Results Summary

Dataset	ranaseq_carol_ns_sel_exprs.ranaseq_carol_ns_sel_phenotype.cls #Fosl1_1_versus_Ctrl
Phenotype	ranaseq_carol_ns_sel_phenotype.cls#Fosl1_1_versus_Ctrl
Upregulated in class	Ctrl
GeneSet	SCHMITT_TNF_2020
Enrichment Score (ES)	-0.51724255
Normalized Enrichment Score (NES)	-1.7726138
Nominal p-value	0.0
FDR q-value	8.502024E-5
FWER p-Value	0.001

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL9A1	COL9A1	332	3.493	-0.0015	No
2	GRB10	GRB10	390	2.780	0.0069	No
3	NR4A3	NR4A3	721	1.858	-0.0009	No
4	ATCAY	ATCAY	776	1.779	0.0036	No
5	ROBO1	ROBO1	777	1.778	0.0106	No
6	VWA1	VWA1	820	1.703	0.0153	No
7	AGT	AGT	850	1.666	0.0205	No
8	NTN1	NTN1	865	1.652	0.0264	No
9	SORBS1	SORBS1	901	1.611	0.0311	No
10	PCDH1	PCDH1	915	1.584	0.0367	No
11	RPGR	RPGR	932	1.561	0.0421	No
12	ENPP2	ENPP2	1004	1.473	0.0447	No
13	THY1	THY1	1133	1.343	0.0441	No
14	NRCAM	NRCAM	1147	1.335	0.0487	No
15	RGS3	RGS3	1172	1.319	0.0528	No
16	ASPHD1	ASPHD1	1174	1.318	0.0580	No
17	LRRC4B	LRRC4B	1258	1.249	0.0591	No
18	ZDHHC14	ZDHHC14	1315	1.210	0.0613	No
19	FAM131B	FAM131B	1325	1.204	0.0656	No
20	TMEM151B	TMEM151B	1369	1.172	0.0682	No
21	FAM174B	FAM174B	1413	1.150	0.0708	No
22	ARHGEF4	ARHGEF4	1471	1.126	0.0726	No
23	LIFR	LIFR	1518	1.098	0.0748	No
24	SPARCL1	SPARCL1	1588	1.068	0.0758	No
25	BACE2	BACE2	1714	0.998	0.0740	No
26	GABRB3	GABRB3	1749	0.981	0.0763	No
27	CDH4	CDH4	1768	0.972	0.0793	No
28	APBA1	APBA1	1841	0.939	0.0797	No
29	PLAT	PLAT	1895	0.913	0.0809	No
30	PLLP	PLLP	2039	0.845	0.0777	No
31	SYNGR3	SYNGR3	2457	0.723	0.0615	No
32	IFITM1	IFITM1	2541	0.703	0.0604	No
33	RHPN2	RHPN2	2542	0.703	0.0632	No
34	CABLES1	CABLES1	2565	0.702	0.0649	No
35	CITED1	CITED1	2597	0.692	0.0662	No
36	WIPF3	WIPF3	2769	0.656	0.0610	No
37	EBI3	EBI3	2779	0.654	0.0632	No
38	LAPTM5	LAPTM5	3093	0.631	0.0513	No
39	TRPM8	TRPM8	3102	0.631	0.0534	No
40	DPP4	DPP4	3371	0.602	0.0436	No
41	BMP5	BMP5	3790	0.602	0.0268	No
42	SLC16A9	SLC16A9	3811	0.602	0.0283	No
43	CERS1	CERS1	3985	0.602	0.0227	No
44	NPNT	NPNT	4219	0.589	0.0144	No
45	DACT1	DACT1	4223	0.589	0.0166	No
46	TSC22D4	TSC22D4	4252	0.581	0.0176	No
47	HAS2	HAS2	4313	0.563	0.0170	No
48	PRICKLE1	PRICKLE1	4314	0.563	0.0193	No
49	GUCY1B1	GUCY1B1	4343	0.556	0.0202	No
50	ZIK1	ZIK1	4458	0.526	0.0170	No
51	KLHL5	KLHL5	4470	0.523	0.0186	No
52	ADAMTS9	ADAMTS9	4583	0.495	0.0154	No
53	FJX1	FJX1	4586	0.494	0.0172	No
54	PLEKHF1	PLEKHF1	4621	0.485	0.0176	No
55	TIFA	TIFA	4754	0.461	0.0134	No
56	TAF13	TAF13	4767	0.459	0.0146	No
57	LRP2	LRP2	5086	0.408	0.0017	No
58	SEMA3B	SEMA3B	5180	0.394	-0.0010	No
59	MGAT3	MGAT3	5208	0.389	-0.0007	No
60	PNKD	PNKD	5435	0.359	-0.0096	No
61	NFKBIE	NFKBIE	5568	0.339	-0.0143	No
62	BIRC2	BIRC2	5712	0.319	-0.0196	No
63	RBM3	RBM3	5737	0.317	-0.0194	No
64	LIMD2	LIMD2	5808	0.310	-0.0214	No
65	CNTNAP1	CNTNAP1	6037	0.282	-0.0307	No
66	HIVEP1	HIVEP1	6192	0.264	-0.0367	No
67	ARHGEF40	ARHGEF40	6229	0.261	-0.0374	No
68	TBC1D10A	TBC1D10A	6380	0.244	-0.0432	No
69	MYO5B	MYO5B	6477	0.237	-0.0467	No
70	PLEKHA4	PLEKHA4	6519	0.233	-0.0477	No
71	OSMR	OSMR	6568	0.229	-0.0490	No
72	PTP4A3	PTP4A3	6629	0.222	-0.0508	No
73	ARRDC4	ARRDC4	6734	0.212	-0.0547	No
74	NFKBIA	NFKBIA	6992	0.191	-0.0657	No
75	OSCP1	OSCP1	7036	0.186	-0.0670	No
76	PTX3	PTX3	7074	0.183	-0.0679	No
77	STOM	STOM	7104	0.181	-0.0686	No
78	VGF	VGF	7304	0.163	-0.0770	No
79	IFNGR2	IFNGR2	7369	0.158	-0.0793	No
80	STAT3	STAT3	7386	0.157	-0.0794	No
81	TNIP2	TNIP2	7402	0.155	-0.0795	No
82	NFKBIZ	NFKBIZ	7563	0.143	-0.0862	No
83	PXDN	PXDN	7807	0.131	-0.0968	No
84	SOD2	SOD2	7853	0.129	-0.0984	No
85	NDUFB8	NDUFB8	8393	0.093	-0.1226	No
86	EGR2	EGR2	8467	0.089	-0.1256	No
87	SNX10	SNX10	8494	0.087	-0.1265	No
88	PRKAR1B	PRKAR1B	8512	0.086	-0.1269	No
89	RAB31	RAB31	8535	0.084	-0.1276	No
90	NR4A1	NR4A1	8730	0.071	-0.1362	No
91	ZSWIM4	ZSWIM4	8934	0.057	-0.1452	No
92	IRF3	IRF3	8991	0.053	-0.1476	No
93	ETV6	ETV6	9013	0.052	-0.1483	No
94	CDKAL1	CDKAL1	9296	0.032	-0.1611	No
95	KCNN4	KCNN4	9316	0.031	-0.1618	No
96	PSMD5	PSMD5	9404	0.026	-0.1657	No
97	PHF24	PHF24	9740	0.009	-0.1810	No
98	IL4I1	IL4I1	9764	0.009	-0.1820	No
99	CD83	CD83	9843	0.007	-0.1855	No
100	KLHL6	KLHL6	9968	0.000	-0.1912	No
101	PLPPR4	PLPPR4	10007	0.000	-0.1929	No
102	SYT12	SYT12	10103	0.000	-0.1973	No
103	MPZ	MPZ	10233	0.000	-0.2032	No
104	ETNK2	ETNK2	10469	0.000	-0.2139	No
105	VAX1	VAX1	10785	0.000	-0.2283	No
106	ARHGEF16	ARHGEF16	11121	0.000	-0.2436	No
107	NFE2L3	NFE2L3	11154	0.000	-0.2451	No
108	CYP1A1	CYP1A1	11246	0.000	-0.2492	No
109	APOL6	APOL6	11271	0.000	-0.2503	No
110	ICAM1	ICAM1	11338	0.000	-0.2533	No
111	KREMEN2	KREMEN2	11410	0.000	-0.2566	No
112	OSBPL5	OSBPL5	13260	-0.007	-0.3410	No
113	RNF145	RNF145	13581	-0.030	-0.3555	No
114	NECTIN2	NECTIN2	13793	-0.046	-0.3650	No
115	RAB13	RAB13	13913	-0.054	-0.3702	No
116	RAB35	RAB35	14065	-0.065	-0.3768	No
117	KLF10	KLF10	14253	-0.079	-0.3851	No
118	TRIM8	TRIM8	14402	-0.088	-0.3915	No
119	MITD1	MITD1	14514	-0.096	-0.3962	No
120	GCLM	GCLM	14515	-0.096	-0.3958	No
121	RNF19A	RNF19A	14596	-0.104	-0.3990	No
122	EFTUD2	EFTUD2	14660	-0.109	-0.4015	No
123	RRAS	RRAS	14715	-0.113	-0.4035	No
124	ACSL6	ACSL6	14885	-0.125	-0.4108	No
125	NBL1	NBL1	14933	-0.127	-0.4124	No
126	NCOA7	NCOA7	14975	-0.131	-0.4138	No
127	ABR	ABR	14989	-0.132	-0.4138	No
128	CYLD	CYLD	15176	-0.147	-0.4218	No
129	PLA2G4C	PLA2G4C	15261	-0.155	-0.4250	No
130	ANKRD33B	ANKRD33B	15263	-0.155	-0.4244	No
131	ELL2	ELL2	15283	-0.157	-0.4247	No
132	RESF1	RESF1	15549	-0.184	-0.4361	No
133	F3	F3	15573	-0.188	-0.4364	No
134	LRRN3	LRRN3	15647	-0.195	-0.4389	No
135	MGAT4B	MGAT4B	15692	-0.198	-0.4402	No
136	BCL6	BCL6	15742	-0.205	-0.4416	No
137	PGM2L1	PGM2L1	15874	-0.220	-0.4467	No
138	CD63	CD63	15920	-0.226	-0.4479	No
139	IL6ST	IL6ST	15946	-0.228	-0.4481	No
140	FZD8	FZD8	16129	-0.247	-0.4555	No
141	TMEM158	TMEM158	16135	-0.248	-0.4547	No
142	ADAMTS1	ADAMTS1	16243	-0.261	-0.4586	No
143	INSR	INSR	16258	-0.262	-0.4582	No
144	NFKB1	NFKB1	16397	-0.281	-0.4634	No
145	IFNGR1	IFNGR1	16406	-0.282	-0.4627	No
146	TAPBP	TAPBP	16464	-0.291	-0.4641	No
147	CAMK2D	CAMK2D	16528	-0.301	-0.4658	No
148	MAP3K11	MAP3K11	16590	-0.311	-0.4674	No
149	SFRP1	SFRP1	16619	-0.316	-0.4674	No
150	OPTN	OPTN	16624	-0.316	-0.4664	No
151	SMOC2	SMOC2	16658	-0.322	-0.4666	No
152	SLC35F6	SLC35F6	16794	-0.347	-0.4714	No
153	WARS	WARS	16824	-0.352	-0.4714	No
154	ITGAV	ITGAV	16885	-0.361	-0.4727	No
155	PEPD	PEPD	16916	-0.366	-0.4726	No
156	NUDT4	NUDT4	16962	-0.374	-0.4732	No
157	WWTR1	WWTR1	17052	-0.391	-0.4758	No
158	SQSTM1	SQSTM1	17102	-0.401	-0.4764	No
159	S100A10	S100A10	17113	-0.401	-0.4753	No
160	SPRED3	SPRED3	17123	-0.403	-0.4741	No
161	IL1RAP	IL1RAP	17145	-0.407	-0.4735	No
162	PODXL	PODXL	17226	-0.422	-0.4755	No
163	RIPK1	RIPK1	17281	-0.435	-0.4762	No
164	SEMA4B	SEMA4B	17380	-0.457	-0.4789	No
165	CEMIP2	CEMIP2	17382	-0.458	-0.4772	No
166	CAPN5	CAPN5	17397	-0.461	-0.4760	No
167	TNFRSF1A	TNFRSF1A	17424	-0.466	-0.4754	No
168	NAMPT	NAMPT	17463	-0.475	-0.4752	No
169	UGCG	UGCG	17465	-0.477	-0.4734	No
170	CREB3	CREB3	17466	-0.477	-0.4715	No
171	IRF1	IRF1	17525	-0.496	-0.4722	No
172	FZD5	FZD5	17563	-0.505	-0.4719	No
173	SOCS3	SOCS3	17575	-0.509	-0.4704	No
174	RELB	RELB	17618	-0.519	-0.4703	No
175	GRWD1	GRWD1	17648	-0.531	-0.4696	No
176	CSF1	CSF1	17655	-0.533	-0.4678	No
177	RDH10	RDH10	17719	-0.554	-0.4685	No
178	DUSP5	DUSP5	17740	-0.564	-0.4672	No
179	ALPK1	ALPK1	17754	-0.568	-0.4655	No
180	B2M	B2M	17776	-0.577	-0.4642	No
181	SLC2A3	SLC2A3	17819	-0.591	-0.4638	No
182	TNFRSF9	TNFRSF9	17909	-0.599	-0.4655	No
183	VDR	VDR	18436	-0.602	-0.4872	No
184	CTSS	CTSS	18507	-0.602	-0.4880	No
185	EGFLAM	EGFLAM	18516	-0.602	-0.4860	No
186	ADAM19	ADAM19	18957	-0.604	-0.5038	No
187	ARL6IP5	ARL6IP5	19004	-0.619	-0.5034	No
188	PTPRE	PTPRE	19012	-0.621	-0.5013	No
189	C4A	C4A	19023	-0.624	-0.4993	No
190	ASB9	ASB9	19116	-0.630	-0.5011	No
191	STAP2	STAP2	19230	-0.632	-0.5037	No
192	PPP1R18	PPP1R18	19319	-0.632	-0.5053	No
193	SGK1	SGK1	19582	-0.680	-0.5146	Yes
194	PDGFA	PDGFA	19619	-0.685	-0.5135	Yes
195	CITED4	CITED4	19636	-0.688	-0.5116	Yes
196	FAM129A	FAM129A	19666	-0.692	-0.5102	Yes
197	ORAI1	ORAI1	19681	-0.697	-0.5081	Yes
198	GFRA1	GFRA1	19801	-0.714	-0.5107	Yes
199	ZFP36	ZFP36	19806	-0.715	-0.5081	Yes
200	RELL1	RELL1	19837	-0.732	-0.5066	Yes
201	NAB2	NAB2	19840	-0.733	-0.5038	Yes
202	TNFAIP3	TNFAIP3	19849	-0.737	-0.5013	Yes
203	HMOX1	HMOX1	19857	-0.741	-0.4987	Yes
204	VMP1	VMP1	19880	-0.754	-0.4967	Yes
205	ADAMTS4	ADAMTS4	19883	-0.756	-0.4938	Yes
206	CARS	CARS	19892	-0.762	-0.4912	Yes
207	TNC	TNC	19997	-0.820	-0.4927	Yes
208	IER2	IER2	20032	-0.844	-0.4910	Yes
209	CRABP2	CRABP2	20038	-0.850	-0.4879	Yes
210	A2M	A2M	20053	-0.858	-0.4851	Yes
211	L1CAM	L1CAM	20076	-0.874	-0.4827	Yes
212	RIOX2	RIOX2	20095	-0.886	-0.4801	Yes
213	PMP22	PMP22	20136	-0.915	-0.4783	Yes
214	JCAD	JCAD	20142	-0.916	-0.4749	Yes
215	FOSL2	FOSL2	20154	-0.923	-0.4718	Yes
216	PGBD5	PGBD5	20211	-0.958	-0.4706	Yes
217	DUSP6	DUSP6	20231	-0.966	-0.4677	Yes
218	SH2B3	SH2B3	20275	-0.993	-0.4657	Yes
219	LPGAT1	LPGAT1	20314	-1.022	-0.4635	Yes
220	ISG20	ISG20	20319	-1.025	-0.4596	Yes
221	CDKN1A	CDKN1A	20334	-1.035	-0.4562	Yes
222	KLF5	KLF5	20369	-1.057	-0.4536	Yes
223	NFKB2	NFKB2	20422	-1.090	-0.4517	Yes
224	MICALL2	MICALL2	20439	-1.100	-0.4481	Yes
225	LGALS1	LGALS1	20466	-1.122	-0.4449	Yes
226	CD44	CD44	20484	-1.138	-0.4412	Yes
227	IFIH1	IFIH1	20489	-1.142	-0.4369	Yes
228	IRAK2	IRAK2	20518	-1.156	-0.4336	Yes
229	BATF3	BATF3	20525	-1.162	-0.4294	Yes
230	JUNB	JUNB	20559	-1.193	-0.4262	Yes
231	CEBPB	CEBPB	20573	-1.206	-0.4220	Yes
232	CSRNP1	CSRNP1	20633	-1.244	-0.4199	Yes
233	CDKN2B	CDKN2B	20635	-1.246	-0.4150	Yes
234	ERAP1	ERAP1	20645	-1.256	-0.4105	Yes
235	SERTAD1	SERTAD1	20654	-1.268	-0.4059	Yes
236	EMP1	EMP1	20675	-1.290	-0.4017	Yes
237	EMILIN1	EMILIN1	20686	-1.301	-0.3971	Yes
238	GAP43	GAP43	20696	-1.306	-0.3924	Yes
239	CSRP2	CSRP2	20706	-1.319	-0.3876	Yes
240	FGF2	FGF2	20771	-1.362	-0.3852	Yes
241	NRG1	NRG1	20780	-1.369	-0.3802	Yes
242	PDGFRL	PDGFRL	20822	-1.421	-0.3765	Yes
243	BCL3	BCL3	20841	-1.433	-0.3717	Yes
244	CXCL10	CXCL10	20842	-1.433	-0.3660	Yes
245	NUAK2	NUAK2	20847	-1.435	-0.3606	Yes
246	TAGLN2	TAGLN2	20860	-1.446	-0.3554	Yes
247	IER3	IER3	20879	-1.462	-0.3505	Yes
248	BMP2	BMP2	20892	-1.469	-0.3453	Yes
249	IGFBP3	IGFBP3	20978	-1.584	-0.3430	Yes
250	SYNPO	SYNPO	20979	-1.585	-0.3368	Yes
251	MAOB	MAOB	20984	-1.598	-0.3307	Yes
252	LIF	LIF	21001	-1.620	-0.3250	Yes
253	TIMP1	TIMP1	21019	-1.640	-0.3194	Yes
254	MATN2	MATN2	21088	-1.736	-0.3157	Yes
255	DRAM1	DRAM1	21092	-1.743	-0.3090	Yes
256	SPSB1	SPSB1	21149	-1.811	-0.3044	Yes
257	ALPL	ALPL	21154	-1.823	-0.2974	Yes
258	SDC4	SDC4	21156	-1.825	-0.2903	Yes
259	TMEM173	TMEM173	21215	-1.892	-0.2855	Yes
260	FAM43A	FAM43A	21225	-1.908	-0.2785	Yes
261	DTX3L	DTX3L	21258	-1.965	-0.2722	Yes
262	AHNAK2	AHNAK2	21336	-2.071	-0.2676	Yes
263	PIK3CD	PIK3CD	21350	-2.088	-0.2600	Yes
264	RASEF	RASEF	21382	-2.148	-0.2530	Yes
265	TGFB1	TGFB1	21432	-2.224	-0.2465	Yes
266	SERPINE1	SERPINE1	21444	-2.262	-0.2381	Yes
267	CDC42EP5	CDC42EP5	21454	-2.290	-0.2295	Yes
268	TNFRSF12A	TNFRSF12A	21458	-2.302	-0.2206	Yes
269	SPP1	SPP1	21467	-2.320	-0.2119	Yes
270	EMP3	EMP3	21469	-2.325	-0.2028	Yes
271	ANXA1	ANXA1	21470	-2.327	-0.1937	Yes
272	FADS3	FADS3	21473	-2.332	-0.1846	Yes
273	LARP6	LARP6	21510	-2.448	-0.1766	Yes
274	PERP	PERP	21556	-2.592	-0.1685	Yes
275	RGS16	RGS16	21614	-2.607	-0.1609	Yes
276	SLC16A3	SLC16A3	21618	-2.631	-0.1507	Yes
277	ARNTL2	ARNTL2	21640	-2.721	-0.1410	Yes
278	DOC2B	DOC2B	21645	-2.752	-0.1303	Yes
279	TRAF1	TRAF1	21676	-2.868	-0.1205	Yes
280	PLCD3	PLCD3	21731	-2.965	-0.1113	Yes
281	AHR	AHR	21751	-3.049	-0.1002	Yes
282	PLAU	PLAU	21807	-3.644	-0.0884	Yes
283	PARP9	PARP9	21822	-3.803	-0.0741	Yes
284	LHX9	LHX9	21826	-3.827	-0.0592	Yes
285	ADAMTS14	ADAMTS14	21835	-4.110	-0.0434	Yes
286	EMILIN2	EMILIN2	21967	-5.000	-0.0298	Yes
287	SGPP2	SGPP2	22000	-5.000	-0.0116	Yes
288	LOXL2	LOXL2	22003	-5.000	0.0079	Yes