Details for gene set VERHAAK_NEU

Table: GSEA Results Summary

Dataset	shNF1_exprs.shNF1_phenotype.cls #shNF1_versus_shCtrl.shNF1_phenotype.cls #shNF1_versus_shCtrl_repos
Phenotype	shNF1_phenotype.cls#shNF1_versus_shCtrl_repos
Upregulated in class	shCtrl
GeneSet	VERHAAK_NEU_2010
Enrichment Score (ES)	-0.25262275
Normalized Enrichment Score (NES)	-1.0977135
Nominal p-value	0.25906736
FDR q-value	0.38658342
FWER p-Value	0.998

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BASP1	BASP1	136	0.084	0.0198	No
2	EDIL3	EDIL3	169	0.080	0.0433	No
3	KIAA1598	KIAA1598	361	0.067	0.0553	No
4	ANKRD46	ANKRD46	412	0.065	0.0732	No
5	MBP	MBP	741	0.055	0.0751	No
6	EPB41L3	EPB41L3	764	0.055	0.0911	No
7	USP33	USP33	937	0.052	0.0992	No
8	PPP2R5A	PPP2R5A	1498	0.043	0.0865	No
9	FEZF2	FEZF2	1595	0.042	0.0952	No
10	MYBPC1	MYBPC1	1665	0.042	0.1050	No
11	MAT2B	MAT2B	1715	0.041	0.1155	No
12	BCAS1	BCAS1	2069	0.038	0.1108	No
13	SPAST	SPAST	2072	0.038	0.1225	No
14	ADD3	ADD3	2214	0.037	0.1273	No
15	CCK	CCK	2539	0.034	0.1228	No
16	PARP8	PARP8	2634	0.033	0.1288	No
17	MMD	MMD	2816	0.032	0.1304	No
18	FBXO3	FBXO3	3112	0.030	0.1260	No
19	VIP	VIP	3142	0.030	0.1340	No
20	DYNC1I1	DYNC1I1	3196	0.030	0.1407	No
21	YPEL5	YPEL5	3639	0.027	0.1285	No
22	HPCAL4	HPCAL4	3697	0.027	0.1341	No
23	CPNE6	CPNE6	3837	0.026	0.1357	No
24	CRYZL1	CRYZL1	3990	0.025	0.1364	No
25	SNCG	SNCG	4086	0.025	0.1396	No
26	MORF4L2	MORF4L2	4334	0.023	0.1353	No
27	AGTPBP1	AGTPBP1	4518	0.022	0.1338	No
28	SLCO1A2	SLCO1A2	4612	0.022	0.1363	No
29	DHRS9	DHRS9	5582	0.018	0.0966	No
30	EVI2A	EVI2A	5634	0.017	0.0996	No
31	IMPA1	IMPA1	5662	0.017	0.1037	No
32	PLCL1	PLCL1	5924	0.016	0.0966	No
33	CRYM	CRYM	6273	0.015	0.0849	No
34	PPFIA2	PPFIA2	6529	0.014	0.0773	No
35	TSNAX	TSNAX	6572	0.014	0.0796	No
36	GNAI1	GNAI1	6998	0.012	0.0635	No
37	CASQ1	CASQ1	7579	0.010	0.0396	No
38	SLC30A10	SLC30A10	7589	0.010	0.0422	No
39	PEX19	PEX19	7643	0.010	0.0428	No
40	TMEM144	TMEM144	7676	0.010	0.0443	No
41	HPRT1	HPRT1	7706	0.010	0.0459	No
42	HPCA	HPCA	7734	0.009	0.0476	No
43	SLC31A2	SLC31A2	7855	0.009	0.0448	No
44	PEX11B	PEX11B	8192	0.008	0.0316	No
45	SAR1A	SAR1A	8704	0.006	0.0098	No
46	ORC4L	ORC4L	8860	0.006	0.0043	No
47	SIRT5	SIRT5	8862	0.006	0.0061	No
48	PSCD1	PSCD1	9279	0.004	-0.0120	No
49	SNX11	SNX11	9283	0.004	-0.0108	No
50	SH3GL3	SH3GL3	9333	0.004	-0.0117	No
51	ANXA3	ANXA3	9520	0.004	-0.0193	No
52	ENPP4	ENPP4	9521	0.004	-0.0182	No
53	GPR22	GPR22	9777	0.003	-0.0292	No
54	REPS2	REPS2	9937	0.002	-0.0359	No
55	ENPP2	ENPP2	9984	0.002	-0.0374	No
56	SLC16A7	SLC16A7	10069	0.002	-0.0408	No
57	ANXA7	ANXA7	10395	0.001	-0.0557	No
58	FAM49B	FAM49B	10790	-0.000	-0.0739	No
59	THTPA	THTPA	10865	-0.001	-0.0771	No
60	ZNF323	ZNF323	11006	-0.001	-0.0833	No
61	EDG1	EDG1	11045	-0.001	-0.0847	No
62	CUTC	CUTC	11428	-0.002	-0.1017	No
63	FUT9	FUT9	11437	-0.003	-0.1013	No
64	ACSL4	ACSL4	11692	-0.003	-0.1121	No
65	KCNK1	KCNK1	11747	-0.004	-0.1135	No
66	CHN1	CHN1	12022	-0.004	-0.1249	No
67	SEPP1	SEPP1	12146	-0.005	-0.1291	No
68	GABRB2	GABRB2	12157	-0.005	-0.1280	No
69	UGT8	UGT8	12182	-0.005	-0.1276	No
70	GRM3	GRM3	12517	-0.006	-0.1413	No
71	TTC1	TTC1	12623	-0.006	-0.1442	No
72	PPA1	PPA1	12702	-0.007	-0.1457	No
73	NTSR2	NTSR2	12778	-0.007	-0.1471	No
74	BEST1	BEST1	12800	-0.007	-0.1459	No
75	ANKS1B	ANKS1B	12848	-0.007	-0.1458	No
76	MDH1	MDH1	12859	-0.007	-0.1441	No
77	MGC72080	MGC72080	13033	-0.008	-0.1497	No
78	ATRNL1	ATRNL1	13338	-0.009	-0.1611	No
79	PGBD5	PGBD5	13582	-0.010	-0.1695	No
80	NDRG2	NDRG2	13872	-0.011	-0.1797	No
81	ATP5L	ATP5L	13996	-0.011	-0.1820	No
82	ATP5F1	ATP5F1	14275	-0.012	-0.1912	No
83	CLCA4	CLCA4	14478	-0.013	-0.1967	No
84	CALM2	CALM2	14676	-0.014	-0.2016	No
85	FXYD1	FXYD1	14877	-0.014	-0.2065	No
86	FHIT	FHIT	15288	-0.016	-0.2207	No
87	VSX1	VSX1	15594	-0.017	-0.2295	No
88	CCDC121	CCDC121	16091	-0.019	-0.2466	Yes
89	AKR7A3	AKR7A3	16167	-0.020	-0.2440	Yes
90	CDR1	CDR1	16240	-0.020	-0.2411	Yes
91	KCNJ3	KCNJ3	16394	-0.021	-0.2417	Yes
92	SGK3	SGK3	16412	-0.021	-0.2360	Yes
93	LYRM1	LYRM1	16576	-0.022	-0.2369	Yes
94	PPP1R1A	PPP1R1A	16579	-0.022	-0.2302	Yes
95	POPDC3	POPDC3	16588	-0.022	-0.2238	Yes
96	NSL1	NSL1	16698	-0.022	-0.2220	Yes
97	SERPINI1	SERPINI1	16810	-0.023	-0.2201	Yes
98	CRBN	CRBN	16841	-0.023	-0.2144	Yes
99	GABARAPL2	GABARAPL2	16890	-0.023	-0.2094	Yes
100	NANOS1	NANOS1	16932	-0.023	-0.2041	Yes
101	RND1	RND1	17096	-0.024	-0.2042	Yes
102	TTPA	TTPA	17957	-0.029	-0.2353	Yes
103	ARRB1	ARRB1	18099	-0.030	-0.2326	Yes
104	CDC42	CDC42	18129	-0.030	-0.2247	Yes
105	GRM1	GRM1	18251	-0.031	-0.2208	Yes
106	SCHIP1	SCHIP1	18694	-0.033	-0.2311	Yes
107	TPM3	TPM3	18933	-0.035	-0.2313	Yes
108	CRYL1	CRYL1	18993	-0.036	-0.2230	Yes
109	NDUFS3	NDUFS3	19331	-0.038	-0.2269	Yes
110	GUK1	GUK1	19496	-0.039	-0.2223	Yes
111	CAMK2G	CAMK2G	20011	-0.045	-0.2324	Yes
112	COX5B	COX5B	20105	-0.046	-0.2226	Yes
113	MAGEH1	MAGEH1	20147	-0.046	-0.2101	Yes
114	PDE6D	PDE6D	20310	-0.048	-0.2027	Yes
115	TCEAL1	TCEAL1	20313	-0.048	-0.1877	Yes
116	MRPL49	MRPL49	20393	-0.050	-0.1760	Yes
117	TCEAL2	TCEAL2	20439	-0.050	-0.1625	Yes
118	SEPW1	SEPW1	20466	-0.051	-0.1479	Yes
119	ROGDI	ROGDI	20589	-0.053	-0.1372	Yes
120	PRPSAP2	PRPSAP2	20618	-0.054	-0.1218	Yes
121	UROS	UROS	20643	-0.054	-0.1061	Yes
122	AGXT2L1	AGXT2L1	20974	-0.062	-0.1023	Yes
123	CA4	CA4	21108	-0.066	-0.0879	Yes
124	MGST3	MGST3	21259	-0.073	-0.0722	Yes
125	SH3GL2	SH3GL2	21419	-0.085	-0.0532	Yes
126	ACYP2	ACYP2	21488	-0.096	-0.0267	Yes
127	MSRB2	MSRB2	21513	-0.102	0.0039	Yes