DatasetshNF1_exprs.shNF1_phenotype.cls
#shNF1_versus_shCtrl.shNF1_phenotype.cls
#shNF1_versus_shCtrl_repos
PhenotypeshNF1_phenotype.cls#shNF1_versus_shCtrl_repos
Upregulated in classshCtrl
GeneSetSP100_REGULON
Enrichment Score (ES)-0.4345241
Normalized Enrichment Score (NES)-1.8772086
Nominal p-value0.0
FDR q-value5.756579E-4
FWER p-Value0.002
Table: GSEA Results Summary



Fig 1: Enrichment plot: SP100_REGULON   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MDFICMDFIC2710.0720.0058No
2LRP10LRP104790.0620.0121No
3RETSATRETSAT6580.0570.0184No
4MVPMVP7110.0560.0303No
5TBC1D8TBC1D87880.0550.0407No
6NPTNNPTN8780.0530.0501No
7TCIRG1TCIRG110210.0500.0563No
8ELK3ELK310720.0490.0666No
9TAPBPTAPBP15780.0430.0540No
10ITGBL1ITGBL120470.0380.0419No
11LRBALRBA22610.0360.0413No
12OSBPL3OSBPL327550.0330.0266No
13ICAM1ICAM129500.0310.0256No
14GBP1GBP129930.0310.0316No
15PMLPML31500.0300.0320No
16AMIGO2AMIGO231940.0300.0376No
17SMAGPSMAGP34140.0280.0346No
18SOX11SOX1135150.0280.0370No
19E2F5E2F536270.0270.0387No
20CLEC2BCLEC2B41450.0240.0208No
21C1RC1R42140.0240.0238No
22CAMKVCAMKV44890.0230.0168No
23GATA6GATA649620.0200.0000No
24CASP4CASP451060.020-0.0016No
25RAB11FIP5RAB11FIP551430.0200.0017No
26HFEHFE54230.018-0.0066No
27ASB13ASB1358840.016-0.0238No
28SLFN12SLFN1259070.016-0.0207No
29ARPC1BARPC1B61920.015-0.0301No
30RAB27ARAB27A62040.015-0.0267No
31MICAL2MICAL265130.014-0.0376No
32CYLDCYLD65160.014-0.0341No
33HCFC2HCFC266330.013-0.0361No
34FASFAS66890.013-0.0353No
35ERAP2ERAP269280.012-0.0433No
36APOL1APOL173680.011-0.0610No
37LPAR1LPAR178760.009-0.0824No
38SHC1SHC180450.008-0.0880No
39DDX60DDX6083670.007-0.1011No
40PLP2PLP283800.007-0.0998No
41RALBRALB84360.007-0.1005No
42DENND4ADENND4A86470.006-0.1087No
43UTRNUTRN94660.004-0.1458No
44TRIM38TRIM3898760.002-0.1643No
45CHD7CHD799740.002-0.1683No
46IRF2IRF299760.002-0.1678No
47GNSGNS102910.001-0.1821No
48ITGB5ITGB5104570.001-0.1897No
49SLC16A6SLC16A6104680.001-0.1900No
50TPBGTPBG106040.000-0.1962No
51S100A11S100A1110703-0.000-0.2007No
52SP140LSP140L10912-0.001-0.2102No
53TRIM5TRIM511347-0.002-0.2299No
54NUDT11NUDT1111624-0.003-0.2419No
55PARP12PARP1211918-0.004-0.2545No
56C1QTNF1C1QTNF111992-0.004-0.2568No
57SECTM1SECTM112070-0.005-0.2592No
58OAS2OAS212174-0.005-0.2628No
59MMP14MMP1412245-0.005-0.2647No
60TAP1TAP112289-0.005-0.2653No
61KBTBD11KBTBD1112489-0.006-0.2731No
62CASP8CASP812893-0.007-0.2900No
63BACH2BACH212964-0.008-0.2913No
64RUNX2RUNX213175-0.008-0.2990No
65CASP1CASP113302-0.009-0.3026No
66NLRP1NLRP113867-0.011-0.3262No
67INTS9INTS913879-0.011-0.3240No
68SCPEP1SCPEP113899-0.011-0.3222No
69ERAP1ERAP113923-0.011-0.3205No
70PARP3PARP313963-0.011-0.3195No
71BIN1BIN113979-0.011-0.3174No
72PROCRPROCR14056-0.011-0.3181No
73IFI16IFI1614371-0.012-0.3296No
74SDF4SDF414481-0.013-0.3314No
75YPEL1YPEL114618-0.013-0.3343No
76ANXA4ANXA414631-0.013-0.3314No
77VRK1VRK114755-0.014-0.3336No
78TRADDTRADD14833-0.014-0.3336No
79TLR3TLR315001-0.015-0.3376No
80ALADALAD15243-0.016-0.3448No
81WIPI1WIPI115356-0.016-0.3459No
82SEPHS1SEPHS115849-0.018-0.3641No
83MR1MR115904-0.019-0.3619No
84DDODDO16097-0.019-0.3659No
85C1RLC1RL16390-0.021-0.3741No
86APOL3APOL316408-0.021-0.3696No
87BTN3A3BTN3A316601-0.022-0.3730No
88MGLLMGLL16941-0.023-0.3828No
89MFSD1MFSD116964-0.023-0.3778No
90RNASELRNASEL17483-0.026-0.3952No
91B2MB2M17865-0.028-0.4057No
92PSMB8PSMB818363-0.031-0.4209No
93CBX5CBX518368-0.031-0.4130No
94LNPEPLNPEP18551-0.032-0.4132No
95TRIM21TRIM2118682-0.033-0.4108No
96SALL2SALL218895-0.035-0.4118No
97HLA-BHLA-B18926-0.035-0.4042No
98GSDMDGSDMD19445-0.039-0.4184No
99FLT3LGFLT3LG19792-0.042-0.4238Yes
100CUEDC2CUEDC219824-0.042-0.4144Yes
101APOBEC3GAPOBEC3G19920-0.044-0.4076Yes
102MX1MX119984-0.044-0.3992Yes
103OSTF1OSTF120018-0.045-0.3893Yes
104DDX58DDX5820077-0.045-0.3804Yes
105IFIT3IFIT320082-0.045-0.3690Yes
106SAMD9SAMD920134-0.046-0.3596Yes
107HERC5HERC520185-0.047-0.3501Yes
108MTSS1MTSS120289-0.048-0.3426Yes
109PHF11PHF1120428-0.050-0.3362Yes
110HLA-FHLA-F20653-0.054-0.3327Yes
111HERC6HERC620663-0.055-0.3192Yes
112IRF1IRF120690-0.055-0.3063Yes
113PPICPPIC20717-0.056-0.2933Yes
114SP110SP11020846-0.058-0.2844Yes
115APOMAPOM20908-0.060-0.2719Yes
116TMEM140TMEM14020922-0.060-0.2571Yes
117HLA-EHLA-E20930-0.061-0.2419Yes
118RTP4RTP421020-0.063-0.2299Yes
119BLVRBBLVRB21104-0.066-0.2168Yes
120HLA-CHLA-C21127-0.067-0.2007Yes
121DHX58DHX5821153-0.068-0.1844Yes
122TAPBPLTAPBPL21272-0.074-0.1710Yes
123NMINMI21290-0.075-0.1527Yes
124TNFRSF14TNFRSF1421312-0.076-0.1343Yes
125STAT1STAT121320-0.076-0.1152Yes
126IFI35IFI3521374-0.081-0.0970Yes
127XAF1XAF121402-0.084-0.0769Yes
128PSMB9PSMB921406-0.084-0.0555Yes
129C19orf66C19orf6621434-0.087-0.0345Yes
130BST2BST221587-0.1640.0004Yes
Table: GSEA details [plain text format]



Fig 2: SP100_REGULON   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SP100_REGULON: Random ES distribution   
Gene set null distribution of ES for SP100_REGULON