DatasetshNF1_exprs.shNF1_phenotype.cls
#shNF1_versus_shCtrl.shNF1_phenotype.cls
#shNF1_versus_shCtrl_repos
PhenotypeshNF1_phenotype.cls#shNF1_versus_shCtrl_repos
Upregulated in classshNF1
GeneSetNEFTEL_MES1_2019
Enrichment Score (ES)0.38040766
Normalized Enrichment Score (NES)1.4326468
Nominal p-value0.03448276
FDR q-value0.028057724
FWER p-Value0.243
Table: GSEA Results Summary



Fig 1: Enrichment plot: NEFTEL_MES1_2019   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GFPT2GFPT240.1410.0927Yes
2CD44CD441410.0840.1415Yes
3NAMPTNAMPT4260.0650.1710Yes
4GJA1GJA17050.0560.1951Yes
5SERPINE1SERPINE17250.0560.2310Yes
6EFEMP1EFEMP19730.0510.2532Yes
7ANXA2ANXA211460.0480.2770Yes
8WWTR1WWTR111550.0480.3083Yes
9ACTN1ACTN112270.0470.3359Yes
10EMP1EMP115600.0430.3487Yes
11CLIC4CLIC421720.0370.3448Yes
12MGST1MGST123640.0360.3593Yes
13SPP1SPP124110.0350.3804Yes
14C1RC1R42140.0240.3125No
15C8orf4C8orf444950.0230.3144No
16CHI3L1CHI3L147520.0210.3166No
17TAGLN2TAGLN248440.0210.3262No
18ANXA1ANXA152930.0190.3179No
19GSNGSN66340.0130.2645No
20C1SC1S67660.0130.2669No
21VIMVIM70530.0120.2614No
22SERPING1SERPING170770.0120.2680No
23C3C371140.0120.2740No
24PRDX6PRDX671450.0110.2802No
25PLP2PLP283800.0070.2277No
26MT1EMT1E84100.0070.2311No
27S100A16S100A1693360.0040.1910No
28TUBA1CTUBA1C104930.0010.1376No
29MT2AMT2A105780.0000.1339No
30S100A11S100A1110703-0.0000.1282No
31LGALS1LGALS111128-0.0010.1095No
32FN1FN111144-0.0020.1098No
33S100A10S100A1011216-0.0020.1077No
34CLIC1CLIC111509-0.0030.0959No
35CTSBCTSB12661-0.0070.0468No
36RCAN1RCAN112732-0.0070.0480No
37SERPINA3SERPINA314162-0.012-0.0106No
38APOEAPOE15188-0.016-0.0479No
39TIMP1TIMP116033-0.019-0.0745No
40EMP3EMP316399-0.021-0.0777No
41MGPMGP17727-0.028-0.1211No
42TNFRSF1ATNFRSF1A18376-0.031-0.1305No
43IGFBP7IGFBP718392-0.032-0.1104No
44NNMTNNMT18514-0.032-0.0948No
45MT1XMT1X19177-0.037-0.1012No
46NPC2NPC220205-0.047-0.1179No
47SOD2SOD220301-0.048-0.0905No
48A2MA2M20660-0.055-0.0711No
49LGALS3LGALS321310-0.076-0.0513No
50IFITM3IFITM321498-0.0980.0045No
Table: GSEA details [plain text format]



Fig 2: NEFTEL_MES1_2019   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NEFTEL_MES1_2019: Random ES distribution   
Gene set null distribution of ES for NEFTEL_MES1_2019