DatasetNF1_GRD_exprs.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl_repos
PhenotypeNF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in classCtrl
GeneSetWANG_MES_2017
Enrichment Score (ES)-0.3735108
Normalized Enrichment Score (NES)-1.3397602
Nominal p-value0.0831643
FDR q-value0.063794345
FWER p-Value0.543
Table: GSEA Results Summary



Fig 1: Enrichment plot: WANG_MES_2017   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TGFBITGFBI1370.1110.0555No
2ITGB1ITGB16770.0700.0699No
3COL5A1COL5A113920.0530.0663No
4CNN2CNN220160.0450.0623No
5GPRC5AGPRC5A20520.0440.0854No
6RGS2RGS221540.0430.1048No
7BCL3BCL323070.0410.1207No
8ANPEPANPEP27060.0380.1234No
9COL3A1COL3A127430.0370.1426No
10RARRES1RARRES131840.0340.1411No
11SLPISLPI34270.0320.1478No
12BACE2BACE238970.0290.1422No
13TNFAIP8TNFAIP841280.0270.1469No
14LOXLOX50140.0220.1184No
15GLIPR1GLIPR182580.009-0.0273No
16MMP7MMP791290.006-0.0646No
17CDCP1CDCP193980.005-0.0745No
18RAC2RAC294550.004-0.0746No
19FTLFTL95430.004-0.0765No
20COL1A2COL1A299390.003-0.0934No
21THBS1THBS110919-0.001-0.1384No
22ACPPACPP10996-0.001-0.1413No
23IL6IL611217-0.002-0.1504No
24CD72CD7211460-0.003-0.1601No
25RUNX1RUNX111533-0.003-0.1617No
26COL15A1COL15A112559-0.007-0.2056No
27RAB27ARAB27A12626-0.007-0.2048No
28PTGS2PTGS213295-0.009-0.2306No
29PI3PI313838-0.011-0.2493No
30CAV1CAV114427-0.014-0.2690No
31BNC2BNC214603-0.014-0.2690No
32COL1A1COL1A114878-0.016-0.2731No
33LUMLUM15213-0.017-0.2791No
34SPAG4SPAG415315-0.017-0.2741No
35VDRVDR15499-0.018-0.2724No
36NNMTNNMT16336-0.022-0.2989No
37IL7RIL7R17107-0.026-0.3202No
38SYNGR2SYNGR217709-0.029-0.3317No
39CTSBCTSB18445-0.034-0.3467No
40SDC1SDC118831-0.037-0.3438No
41P4HA2P4HA219472-0.043-0.3493Yes
42PLAURPLAUR19606-0.045-0.3304Yes
43CTSCCTSC19916-0.049-0.3175Yes
44CYP1B1CYP1B120518-0.059-0.3126Yes
45S100A11S100A1121047-0.075-0.2953Yes
46ARPC1BARPC1B21177-0.082-0.2555Yes
47LY96LY9621395-0.104-0.2075Yes
48PRSS23PRSS2321462-0.116-0.1456Yes
49IER3IER321480-0.122-0.0782Yes
50NDRG1NDRG121524-0.1490.0033Yes
Table: GSEA details [plain text format]



Fig 2: WANG_MES_2017   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WANG_MES_2017: Random ES distribution   
Gene set null distribution of ES for WANG_MES_2017