DatasetNF1_GRD_exprs.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl_repos
PhenotypeNF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in classCtrl
GeneSetSOX11_REGULON
Enrichment Score (ES)-0.33689862
Normalized Enrichment Score (NES)-1.4327704
Nominal p-value0.015779093
FDR q-value0.031647433
FWER p-Value0.305
Table: GSEA Results Summary



Fig 1: Enrichment plot: SOX11_REGULON   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ANXA2ANXA2410.1640.0313No
2TRA2ATRA2A950.1290.0549No
3CTNND2CTNND21420.1090.0750No
4MAP2MAP21450.1080.0968No
5TRIM9TRIM92100.0990.1140No
6LANCL2LANCL22240.0960.1330No
7KIFAP3KIFAP32590.0930.1502No
8MCF2LMCF2L3430.0870.1639No
9ADNPADNP6870.0700.1622No
10SCPEP1SCPEP18200.0650.1692No
11TGFBR2TGFBR28350.0650.1817No
12TMEM14ATMEM14A9500.0620.1889No
13BSNBSN9560.0620.2012No
14MARCKSL1MARCKSL115000.0510.1863No
15ARHGEF7ARHGEF715790.0500.1928No
16TRIM24TRIM2416260.0490.2007No
17DBN1DBN118520.0460.1997No
18TGFBRAP1TGFBRAP120080.0450.2015No
19ZMIZ1ZMIZ125440.0390.1845No
20ZNF219ZNF21925820.0390.1906No
21SMARCE1SMARCE131900.0340.1692No
22ITGA2ITGA232970.0330.1710No
23MAN1B1MAN1B134110.0320.1722No
24SNTA1SNTA134560.0320.1766No
25CDK5R1CDK5R140540.0280.1545No
26ZNF75DZNF75D42610.0270.1503No
27LRPPRCLRPPRC45040.0250.1442No
28IL13RA1IL13RA146250.0250.1436No
29CRMP1CRMP149890.0230.1312No
30TUBB2BTUBB2B51450.0220.1284No
31NFS1NFS153080.0210.1251No
32BCANBCAN53830.0210.1259No
33VEZF1VEZF154510.0200.1269No
34CHD7CHD760150.0180.1042No
35MARK1MARK160780.0170.1049No
36PIK3C2BPIK3C2B61420.0170.1054No
37PDE8APDE8A62410.0170.1042No
38PIGBPIGB63150.0160.1042No
39DPF1DPF164160.0160.1027No
40TECTEC66510.0150.0949No
41CYFIP2CYFIP267760.0140.0920No
42ZNF254ZNF25468370.0140.0921No
43HNRNPA0HNRNPA072930.0120.0734No
44GPM6AGPM6A77170.0110.0558No
45UBE2D2UBE2D281160.0090.0392No
46APC2APC285520.0080.0205No
47TCIRG1TCIRG186780.0070.0161No
48DCTDDCTD87450.0070.0144No
49SARM1SARM189480.0060.0062No
50CSNK1DCSNK1D93240.005-0.0102No
51SEMA6CSEMA6C94670.004-0.0160No
52CYTH2CYTH297890.003-0.0303No
53TRIM36TRIM3699580.002-0.0377No
54ADCY1ADCY199860.002-0.0384No
55TRIM38TRIM38100820.002-0.0424No
56NAT1NAT110918-0.001-0.0812No
57MYO1EMYO1E10966-0.001-0.0831No
58HLA-EHLA-E11037-0.001-0.0861No
59NLRX1NLRX111106-0.002-0.0890No
60ADNP2ADNP211127-0.002-0.0896No
61PTOV1PTOV111141-0.002-0.0899No
62SLC17A5SLC17A511303-0.002-0.0969No
63MYOFMYOF11422-0.003-0.1019No
64NOVA1NOVA111602-0.003-0.1095No
65C1orf61C1orf6112173-0.005-0.1350No
66AUHAUH12522-0.007-0.1499No
67LDLRAP1LDLRAP112576-0.007-0.1510No
68RAB27ARAB27A12626-0.007-0.1519No
69ARVCFARVCF12762-0.007-0.1567No
70CXCL5CXCL512926-0.008-0.1627No
71PABPN1PABPN113663-0.011-0.1948No
72SS18L1SS18L114001-0.012-0.2081No
73NPC2NPC214183-0.013-0.2139No
74ZNF195ZNF19514301-0.013-0.2167No
75NKAIN1NKAIN114356-0.013-0.2165No
76ANO10ANO1014825-0.015-0.2351No
77EPS8EPS814980-0.016-0.2391No
78ENTPD4ENTPD415021-0.016-0.2377No
79SPAG4SPAG415315-0.017-0.2478No
80HMGCLHMGCL15586-0.019-0.2566No
81PPICPPIC16165-0.021-0.2792No
82TRMT2BTRMT2B16211-0.021-0.2770No
83FHOD1FHOD117016-0.025-0.3093No
84ANKRD10ANKRD1017079-0.026-0.3069No
85TAPBPTAPBP17481-0.028-0.3200No
86ZNF93ZNF9317671-0.029-0.3229No
87TPD52L1TPD52L117830-0.030-0.3242No
88BCAS3BCAS318021-0.031-0.3267No
89IRAK4IRAK418240-0.033-0.3303Yes
90MVPMVP18318-0.033-0.3272Yes
91MYLKMYLK18526-0.035-0.3298Yes
92CALCOCO2CALCOCO218581-0.035-0.3252Yes
93SP100SP10018830-0.037-0.3292Yes
94PGAP1PGAP118844-0.037-0.3222Yes
95GNG3GNG318848-0.037-0.3148Yes
96DFFADFFA19050-0.039-0.3162Yes
97LMNALMNA19085-0.039-0.3098Yes
98DNM3DNM319167-0.040-0.3054Yes
99HIPK2HIPK219182-0.040-0.2978Yes
100RSBN1RSBN119450-0.043-0.3015Yes
101CASTCAST19519-0.044-0.2958Yes
102LMAN1LMAN119532-0.044-0.2875Yes
103GALK1GALK119562-0.044-0.2798Yes
104SLC10A3SLC10A319691-0.046-0.2765Yes
105WWP1WWP119762-0.047-0.2703Yes
106OLIG2OLIG219896-0.049-0.2667Yes
107BTCBTC20078-0.051-0.2647Yes
108ARAFARAF20386-0.056-0.2677Yes
109ACSF2ACSF220708-0.064-0.2697Yes
110RNFT2RNFT220811-0.067-0.2609Yes
111SHC3SHC320860-0.068-0.2494Yes
112AHNAKAHNAK20906-0.070-0.2373Yes
113WNT5BWNT5B20925-0.070-0.2239Yes
114STK3STK320977-0.072-0.2117Yes
115S100A11S100A1121047-0.075-0.1998Yes
116PLD1PLD121074-0.076-0.1856Yes
117ATG4AATG4A21108-0.078-0.1714Yes
118ARPC1BARPC1B21177-0.082-0.1580Yes
119PLP2PLP221203-0.083-0.1422Yes
120PEX6PEX621211-0.084-0.1254Yes
121LTBP2LTBP221266-0.088-0.1101Yes
122MICAL2MICAL221308-0.091-0.0934Yes
123PROCRPROCR21321-0.093-0.0750Yes
124BLVRBBLVRB21350-0.098-0.0565Yes
125HTATIP2HTATIP221373-0.101-0.0371Yes
126WIPI1WIPI121433-0.109-0.0178Yes
127SDC4SDC421489-0.1250.0049Yes
Table: GSEA details [plain text format]



Fig 2: SOX11_REGULON   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SOX11_REGULON: Random ES distribution   
Gene set null distribution of ES for SOX11_REGULON