Details for gene set PHILLIPS_PN

Table: GSEA Results Summary

Dataset	NF1_GRD_exprs.NF1_GRD_phenotype.cls #GRD_versus_Ctrl.NF1_GRD_phenotype.cls #GRD_versus_Ctrl_repos
Phenotype	NF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in class	GRD
GeneSet	PHILLIPS_PN_2006
Enrichment Score (ES)	0.28624728
Normalized Enrichment Score (NES)	1.3187621
Nominal p-value	0.024948025
FDR q-value	0.103173785
FWER p-Value	0.592

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NTRK2	NTRK2	14	0.225	0.0274	Yes
2	GRIA2	GRIA2	27	0.178	0.0490	Yes
3	HEY2	HEY2	45	0.155	0.0676	Yes
4	PCSK1N	PCSK1N	67	0.142	0.0844	Yes
5	TPM1	TPM1	120	0.116	0.0963	Yes
6	TMEM100	TMEM100	139	0.110	0.1093	Yes
7	RTN1	RTN1	141	0.110	0.1229	Yes
8	SNRPN	SNRPN	196	0.100	0.1329	Yes
9	SEZ6L	SEZ6L	228	0.096	0.1434	Yes
10	WNT7B	WNT7B	257	0.093	0.1537	Yes
11	TIMP4	TIMP4	300	0.090	0.1630	Yes
12	FBXO2	FBXO2	380	0.083	0.1697	Yes
13	GPRC5B	GPRC5B	412	0.082	0.1785	Yes
14	SLIT1	SLIT1	417	0.082	0.1885	Yes
15	SOX8	SOX8	446	0.080	0.1972	Yes
16	THRA	THRA	447	0.080	0.2072	Yes
17	GRIA1	GRIA1	461	0.080	0.2165	Yes
18	NCAM1	NCAM1	549	0.075	0.2218	Yes
19	ATP6V1G2	ATP6V1G2	568	0.074	0.2302	Yes
20	GAD1	GAD1	699	0.069	0.2328	Yes
21	TMEM59L	TMEM59L	704	0.069	0.2413	Yes
22	IL17D	IL17D	747	0.068	0.2477	Yes
23	GAB2	GAB2	865	0.064	0.2502	Yes
24	FXYD6	FXYD6	892	0.063	0.2569	Yes
25	SLITRK5	SLITRK5	1282	0.055	0.2455	Yes
26	NUMA1	NUMA1	1291	0.055	0.2520	Yes
27	B3GAT1	B3GAT1	1387	0.053	0.2541	Yes
28	CRYAB	CRYAB	1460	0.052	0.2572	Yes
29	RASSF4	RASSF4	1475	0.052	0.2629	Yes
30	OLIG1	OLIG1	1582	0.050	0.2642	Yes
31	TTYH1	TTYH1	1643	0.049	0.2675	Yes
32	CCNK	CCNK	1657	0.049	0.2731	Yes
33	FSD1	FSD1	1702	0.048	0.2770	Yes
34	ABLIM1	ABLIM1	1755	0.048	0.2805	Yes
35	NAP1L3	NAP1L3	1773	0.047	0.2857	Yes
36	PHYHIPL	PHYHIPL	1884	0.046	0.2862	Yes
37	ZDHHC22	ZDHHC22	2064	0.044	0.2834	No
38	GABBR2	GABBR2	2168	0.043	0.2839	No
39	SCG3	SCG3	2487	0.039	0.2739	No
40	RAC3	RAC3	2573	0.039	0.2748	No
41	LUZP2	LUZP2	2596	0.039	0.2785	No
42	PAR5	PAR5	2609	0.038	0.2828	No
43	KIF1A	KIF1A	2966	0.036	0.2705	No
44	TMOD2	TMOD2	2986	0.035	0.2741	No
45	IKZF5	IKZF5	3062	0.035	0.2749	No
46	DPP10	DPP10	3243	0.033	0.2707	No
47	C1QL1	C1QL1	3268	0.033	0.2737	No
48	FLRT1	FLRT1	3282	0.033	0.2772	No
49	PLCB1	PLCB1	3312	0.033	0.2799	No
50	DUSP26	DUSP26	3426	0.032	0.2786	No
51	KCNQ5	KCNQ5	3550	0.031	0.2768	No
52	F2	F2	3629	0.031	0.2769	No
53	KCNN3	KCNN3	3764	0.030	0.2743	No
54	RIPPLY2	RIPPLY2	3779	0.030	0.2774	No
55	HSPA12A	HSPA12A	3805	0.029	0.2799	No
56	EPB41L2	EPB41L2	3898	0.029	0.2791	No
57	CMTM5	CMTM5	4051	0.028	0.2755	No
58	WDR86	WDR86	4055	0.028	0.2788	No
59	ZNF488	ZNF488	4056	0.028	0.2823	No
60	GNAO1	GNAO1	4075	0.028	0.2849	No
61	C11orf2	C11orf2	4129	0.027	0.2859	No
62	psiTPTE22	psiTPTE22	4259	0.027	0.2832	No
63	LRRC4	LRRC4	4274	0.027	0.2858	No
64	GRID1	GRID1	4446	0.026	0.2810	No
65	CALCRL	CALCRL	4891	0.023	0.2631	No
66	SEC31B	SEC31B	5060	0.022	0.2580	No
67	C13orf15	C13orf15	5174	0.022	0.2554	No
68	BCAN	BCAN	5383	0.021	0.2483	No
69	JPH3	JPH3	5411	0.020	0.2496	No
70	RASL10A	RASL10A	5478	0.020	0.2490	No
71	SCD	SCD	5807	0.019	0.2360	No
72	FAM133A	FAM133A	6041	0.018	0.2272	No
73	CDR1	CDR1	6065	0.017	0.2283	No
74	ADCY2	ADCY2	6135	0.017	0.2272	No
75	SGCG	SGCG	6192	0.017	0.2267	No
76	MMP16	MMP16	6212	0.017	0.2279	No
77	FUT9	FUT9	6298	0.016	0.2260	No
78	AKR1C1	AKR1C1	6548	0.015	0.2163	No
79	OMG	OMG	6713	0.015	0.2104	No
80	NRSN1	NRSN1	6754	0.014	0.2104	No
81	CYFIP2	CYFIP2	6776	0.014	0.2112	No
82	SPHKAP	SPHKAP	6854	0.014	0.2093	No
83	FAM19A5	FAM19A5	7116	0.013	0.1987	No
84	KSR2	KSR2	7151	0.013	0.1987	No
85	NALCN	NALCN	7402	0.012	0.1885	No
86	PCSK6	PCSK6	7448	0.012	0.1879	No
87	FGF14	FGF14	7553	0.011	0.1844	No
88	RAB11FIP4	RAB11FIP4	8028	0.009	0.1634	No
89	SLITRK2	SLITRK2	8043	0.009	0.1639	No
90	PLEKHB1	PLEKHB1	8442	0.008	0.1463	No
91	MPPE1	MPPE1	8462	0.008	0.1464	No
92	HLF	HLF	8477	0.008	0.1467	No
93	ZC3H12B	ZC3H12B	8505	0.008	0.1464	No
94	P2RX7	P2RX7	8606	0.007	0.1427	No
95	ABLIM3	ABLIM3	8694	0.007	0.1395	No
96	SCN3A	SCN3A	8713	0.007	0.1395	No
97	NET1	NET1	8736	0.007	0.1394	No
98	OVOL1	OVOL1	8741	0.007	0.1400	No
99	MARCH8	MARCH8	8792	0.007	0.1385	No
100	PHACTR3	PHACTR3	8842	0.006	0.1370	No
101	PDK2	PDK2	9081	0.006	0.1266	No
102	FAM155A	FAM155A	9087	0.006	0.1271	No
103	SOX6	SOX6	9137	0.006	0.1255	No
104	RASGEF1C	RASGEF1C	9349	0.005	0.1162	No
105	HIP1R	HIP1R	9497	0.004	0.1098	No
106	REPS2	REPS2	9607	0.004	0.1052	No
107	FLJ16779	FLJ16779	9642	0.004	0.1040	No
108	RPRM	RPRM	9737	0.003	0.1000	No
109	KIF5A	KIF5A	9780	0.003	0.0985	No
110	TRIM31	TRIM31	9915	0.003	0.0925	No
111	ASCL1	ASCL1	10271	0.001	0.0761	No
112	EPHB1	EPHB1	10273	0.001	0.0762	No
113	SGSM1	SGSM1	10423	0.001	0.0693	No
114	CSMD3	CSMD3	10441	0.001	0.0686	No
115	P2RY13	P2RY13	10532	0.000	0.0645	No
116	PDK4	PDK4	10548	0.000	0.0638	No
117	NKAIN4	NKAIN4	10550	0.000	0.0638	No
118	MN1	MN1	10563	0.000	0.0633	No
119	BEND7	BEND7	10644	0.000	0.0596	No
120	GNAL	GNAL	10853	-0.001	0.0499	No
121	SORBS1	SORBS1	10911	-0.001	0.0473	No
122	PKNOX2	PKNOX2	11018	-0.001	0.0425	No
123	NTN4	NTN4	11035	-0.001	0.0419	No
124	MAPT	MAPT	11069	-0.001	0.0405	No
125	KCNB1	KCNB1	11153	-0.002	0.0369	No
126	FGF13	FGF13	11372	-0.002	0.0270	No
127	PRKCZ	PRKCZ	11556	-0.003	0.0188	No
128	DOK6	DOK6	11846	-0.004	0.0058	No
129	ARHGAP22	ARHGAP22	12000	-0.005	-0.0008	No
130	PSD	PSD	12036	-0.005	-0.0018	No
131	SORCS3	SORCS3	12038	-0.005	-0.0013	No
132	FGF12	FGF12	12435	-0.006	-0.0190	No
133	GRIA4	GRIA4	12459	-0.006	-0.0193	No
134	TMLHE	TMLHE	12478	-0.006	-0.0194	No
135	DTX4	DTX4	12548	-0.007	-0.0218	No
136	DLL1	DLL1	12760	-0.007	-0.0307	No
137	SMAD9	SMAD9	12940	-0.008	-0.0381	No
138	GABRA3	GABRA3	12970	-0.008	-0.0385	No
139	KLRC3	KLRC3	13100	-0.009	-0.0434	No
140	ASB13	ASB13	13194	-0.009	-0.0467	No
141	C12orf53	C12orf53	13561	-0.010	-0.0625	No
142	SNAP91	SNAP91	13591	-0.010	-0.0626	No
143	FERMT1	FERMT1	13596	-0.010	-0.0615	No
144	AJAP1	AJAP1	13934	-0.012	-0.0758	No
145	CRTC1	CRTC1	14224	-0.013	-0.0877	No
146	PDE2A	PDE2A	14236	-0.013	-0.0866	No
147	SHD	SHD	14332	-0.013	-0.0894	No
148	GABRB3	GABRB3	14334	-0.013	-0.0877	No
149	ZCCHC24	ZCCHC24	14458	-0.014	-0.0918	No
150	DLL3	DLL3	14605	-0.014	-0.0968	No
151	CNTN3	CNTN3	14740	-0.015	-0.1012	No
152	GABBR1	GABBR1	14827	-0.015	-0.1033	No
153	KCTD4	KCTD4	14935	-0.016	-0.1064	No
154	ATRNL1	ATRNL1	15040	-0.016	-0.1092	No
155	NDRG2	NDRG2	15120	-0.017	-0.1109	No
156	DSCAML1	DSCAML1	15376	-0.018	-0.1206	No
157	ID4	ID4	15399	-0.018	-0.1194	No
158	RGS9	RGS9	15474	-0.018	-0.1206	No
159	KIF21B	KIF21B	15568	-0.018	-0.1227	No
160	GPR158	GPR158	15705	-0.019	-0.1267	No
161	MCF2	MCF2	15808	-0.020	-0.1290	No
162	RUNDC3A	RUNDC3A	16030	-0.021	-0.1368	No
163	NEU4	NEU4	16227	-0.022	-0.1433	No
164	FBXL15	FBXL15	16286	-0.022	-0.1433	No
165	GLUD1	GLUD1	16502	-0.023	-0.1505	No
166	STOX1	STOX1	16589	-0.023	-0.1516	No
167	GFRA1	GFRA1	16618	-0.023	-0.1500	No
168	TPCN2	TPCN2	16788	-0.024	-0.1549	No
169	RIMS2	RIMS2	17201	-0.026	-0.1709	No
170	TAL1	TAL1	17243	-0.027	-0.1695	No
171	AP2B1	AP2B1	17307	-0.027	-0.1691	No
172	RPL13	RPL13	17362	-0.027	-0.1682	No
173	ELMO1	ELMO1	17786	-0.030	-0.1843	No
174	USH1C	USH1C	17846	-0.030	-0.1834	No
175	CNTN1	CNTN1	17931	-0.031	-0.1835	No
176	GLUD2	GLUD2	17976	-0.031	-0.1817	No
177	JPH4	JPH4	18046	-0.031	-0.1811	No
178	GGTA1	GGTA1	18047	-0.031	-0.1772	No
179	NRG3	NRG3	18101	-0.032	-0.1757	No
180	SLC25A21	SLC25A21	18124	-0.032	-0.1728	No
181	RPL37	RPL37	18247	-0.033	-0.1744	No
182	PID1	PID1	18259	-0.033	-0.1709	No
183	TNKS2	TNKS2	18264	-0.033	-0.1670	No
184	CBX7	CBX7	18278	-0.033	-0.1635	No
185	FSTL5	FSTL5	18308	-0.033	-0.1608	No
186	SMOC1	SMOC1	18310	-0.033	-0.1567	No
187	SSTR2	SSTR2	18316	-0.033	-0.1528	No
188	ACSM5	ACSM5	18397	-0.034	-0.1524	No
189	MAPK8IP2	MAPK8IP2	18423	-0.034	-0.1493	No
190	CSDC2	CSDC2	18464	-0.034	-0.1469	No
191	FRY	FRY	18585	-0.035	-0.1481	No
192	BMP2	BMP2	18843	-0.037	-0.1555	No
193	HDAC5	HDAC5	18847	-0.037	-0.1510	No
194	SH3GL2	SH3GL2	18995	-0.039	-0.1531	No
195	NOG	NOG	19054	-0.039	-0.1509	No
196	GRIK4	GRIK4	19077	-0.039	-0.1470	No
197	DNM3	DNM3	19167	-0.040	-0.1462	No
198	LGR5	LGR5	19567	-0.044	-0.1593	No
199	EFHA2	EFHA2	19707	-0.046	-0.1601	No
200	SLC1A1	SLC1A1	19759	-0.047	-0.1567	No
201	ALDH5A1	ALDH5A1	19835	-0.048	-0.1543	No
202	OLIG2	OLIG2	19896	-0.049	-0.1510	No
203	CALN1	CALN1	19946	-0.049	-0.1472	No
204	SSTR1	SSTR1	19990	-0.050	-0.1430	No
205	PKP4	PKP4	20046	-0.051	-0.1393	No
206	PARD3	PARD3	20063	-0.051	-0.1337	No
207	ENHO	ENHO	20124	-0.052	-0.1301	No
208	ANKS1B	ANKS1B	20262	-0.054	-0.1297	No
209	MAF	MAF	20429	-0.057	-0.1304	No
210	EHD3	EHD3	20493	-0.058	-0.1262	No
211	ZNF804A	ZNF804A	20595	-0.060	-0.1234	No
212	FAIM2	FAIM2	20666	-0.062	-0.1189	No
213	SUSD5	SUSD5	20697	-0.063	-0.1124	No
214	ARL3	ARL3	20721	-0.064	-0.1055	No
215	CECR6	CECR6	20795	-0.066	-0.1006	No
216	FAM110B	FAM110B	20872	-0.068	-0.0957	No
217	ALDOC	ALDOC	20972	-0.072	-0.0914	No
218	DSCAM	DSCAM	20996	-0.073	-0.0834	No
219	DNAJC12	DNAJC12	21017	-0.073	-0.0752	No
220	OPCML	OPCML	21056	-0.075	-0.0676	No
221	PTGDS	PTGDS	21153	-0.080	-0.0622	No
222	HS3ST4	HS3ST4	21265	-0.088	-0.0564	No
223	ABHD6	ABHD6	21294	-0.090	-0.0465	No
224	SLC1A4	SLC1A4	21329	-0.095	-0.0363	No
225	GALNT13	GALNT13	21474	-0.119	-0.0282	No
226	APOE	APOE	21593	-0.272	0.0001	No