Details for gene set PHILLIPS_MES

Table: GSEA Results Summary

Dataset	NF1_GRD_exprs.NF1_GRD_phenotype.cls #GRD_versus_Ctrl.NF1_GRD_phenotype.cls #GRD_versus_Ctrl_repos
Phenotype	NF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in class	Ctrl
GeneSet	PHILLIPS_MES_2006
Enrichment Score (ES)	-0.41462108
Normalized Enrichment Score (NES)	-1.7570016
Nominal p-value	0.0
FDR q-value	0.0040573115
FWER p-Value	0.014

Table: GSEA details [plain text format]
	SYMBOL	TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SLC16A3	SLC16A3	31	0.173	0.0284	No
2	COL4A2	COL4A2	76	0.139	0.0502	No
3	C1R	C1R	108	0.120	0.0695	No
4	SALL4	SALL4	123	0.114	0.0885	No
5	FAM20C	FAM20C	128	0.112	0.1076	No
6	SOCS3	SOCS3	538	0.076	0.1016	No
7	COL4A1	COL4A1	732	0.068	0.1044	No
8	RHOJ	RHOJ	899	0.063	0.1074	No
9	TWF1	TWF1	911	0.062	0.1177	No
10	FLNA	FLNA	933	0.062	0.1274	No
11	EFEMP2	EFEMP2	1047	0.060	0.1324	No
12	ANGPTL4	ANGPTL4	1289	0.055	0.1306	No
13	OSMR	OSMR	1457	0.052	0.1317	No
14	JUNB	JUNB	1660	0.049	0.1307	No
15	EPAS1	EPAS1	1753	0.048	0.1346	No
16	THBD	THBD	1759	0.048	0.1426	No
17	NRP2	NRP2	1947	0.045	0.1417	No
18	SHC1	SHC1	2099	0.044	0.1421	No
19	BCL3	BCL3	2307	0.041	0.1395	No
20	RYR3	RYR3	2410	0.040	0.1417	No
21	C15orf52	C15orf52	2436	0.040	0.1473	No
22	ANPEP	ANPEP	2706	0.038	0.1413	No
23	PDLIM7	PDLIM7	3162	0.034	0.1259	No
24	PDGFRL	PDGFRL	3174	0.034	0.1312	No
25	PARP10	PARP10	3573	0.031	0.1180	No
26	ACTA2	ACTA2	3608	0.031	0.1217	No
27	FES	FES	3658	0.030	0.1247	No
28	C1QTNF1	C1QTNF1	3773	0.030	0.1245	No
29	STEAP3	STEAP3	3794	0.029	0.1286	No
30	SLC12A9	SLC12A9	3874	0.029	0.1299	No
31	BACE2	BACE2	3897	0.029	0.1338	No
32	LPAR1	LPAR1	3933	0.029	0.1371	No
33	TPP1	TPP1	4503	0.025	0.1150	No
34	TRIM56	TRIM56	4505	0.025	0.1193	No
35	MYL9	MYL9	4571	0.025	0.1205	No
36	FPR2	FPR2	4676	0.024	0.1198	No
37	SGSH	SGSH	4705	0.024	0.1226	No
38	KLF16	KLF16	4901	0.023	0.1175	No
39	GGN	GGN	5113	0.022	0.1114	No
40	DEF6	DEF6	5581	0.020	0.0931	No
41	PVRL2	PVRL2	5908	0.018	0.0810	No
42	NRP1	NRP1	6636	0.015	0.0497	No
43	FLT1	FLT1	6853	0.014	0.0421	No
44	HK3	HK3	7250	0.012	0.0258	No
45	DLC1	DLC1	8159	0.009	-0.0149	No
46	VWA1	VWA1	8282	0.009	-0.0192	No
47	IL32	IL32	8306	0.008	-0.0188	No
48	SHROOM3	SHROOM3	8405	0.008	-0.0219	No
49	CD248	CD248	8480	0.008	-0.0240	No
50	PDGFA	PDGFA	9046	0.006	-0.0494	No
51	PLA2G5	PLA2G5	9825	0.003	-0.0851	No
52	SLC39A8	SLC39A8	10462	0.001	-0.1146	No
53	TAGLN	TAGLN	10574	0.000	-0.1197	No
54	MAP2K3	MAP2K3	10600	0.000	-0.1209	No
55	RRBP1	RRBP1	10959	-0.001	-0.1374	No
56	FOSL2	FOSL2	11178	-0.002	-0.1472	No
57	RUNX1	RUNX1	11533	-0.003	-0.1632	No
58	CA12	CA12	12657	-0.007	-0.2143	No
59	SERPINA1	SERPINA1	12892	-0.008	-0.2238	No
60	CD97	CD97	12979	-0.008	-0.2264	No
61	FCGR2C	FCGR2C	13021	-0.008	-0.2269	No
62	CECR2	CECR2	13164	-0.009	-0.2320	No
63	ACTN1	ACTN1	13245	-0.009	-0.2341	No
64	CD151	CD151	13304	-0.009	-0.2352	No
65	FAM38A	FAM38A	13376	-0.010	-0.2369	No
66	TRIM47	TRIM47	13644	-0.011	-0.2475	No
67	PI3	PI3	13838	-0.011	-0.2545	No
68	HRH1	HRH1	14572	-0.014	-0.2862	No
69	ANGPT2	ANGPT2	14888	-0.016	-0.2982	No
70	LRRC32	LRRC32	15357	-0.018	-0.3170	No
71	TRABD	TRABD	15409	-0.018	-0.3163	No
72	NCLN	NCLN	15460	-0.018	-0.3155	No
73	ECE1	ECE1	15587	-0.019	-0.3182	No
74	MYH9	MYH9	15863	-0.020	-0.3276	No
75	RAB34	RAB34	15885	-0.020	-0.3251	No
76	GPR116	GPR116	16131	-0.021	-0.3329	No
77	PDPN	PDPN	16322	-0.022	-0.3380	No
78	ITGA7	ITGA7	16442	-0.022	-0.3397	No
79	TNC	TNC	16569	-0.023	-0.3416	No
80	PMEPA1	PMEPA1	17051	-0.026	-0.3596	No
81	ESM1	ESM1	17075	-0.026	-0.3563	No
82	ICAM1	ICAM1	17117	-0.026	-0.3537	No
83	LRRC29	LRRC29	17347	-0.027	-0.3597	No
84	C22orf26	C22orf26	17724	-0.029	-0.3722	No
85	SBNO2	SBNO2	17893	-0.030	-0.3748	No
86	MVP	MVP	18318	-0.033	-0.3888	No
87	IFITM2	IFITM2	18618	-0.035	-0.3967	No
88	FGG	FGG	18706	-0.036	-0.3945	No
89	TNFRSF10D	TNFRSF10D	18900	-0.038	-0.3970	No
90	HOMER3	HOMER3	19026	-0.039	-0.3961	No
91	IFITM3	IFITM3	19155	-0.040	-0.3952	No
92	NEURL2	NEURL2	19573	-0.044	-0.4070	Yes
93	PLAUR	PLAUR	19606	-0.045	-0.4008	Yes
94	C1RL	C1RL	19665	-0.046	-0.3956	Yes
95	UNC93B1	UNC93B1	19712	-0.046	-0.3899	Yes
96	TTC38	TTC38	19716	-0.046	-0.3821	Yes
97	EMP3	EMP3	19792	-0.047	-0.3775	Yes
98	ITGA5	ITGA5	20099	-0.051	-0.3829	Yes
99	HSD3B7	HSD3B7	20165	-0.052	-0.3770	Yes
100	LZTS1	LZTS1	20169	-0.052	-0.3682	Yes
101	PTRF	PTRF	20222	-0.053	-0.3614	Yes
102	OSBPL3	OSBPL3	20251	-0.054	-0.3535	Yes
103	FBN1	FBN1	20442	-0.057	-0.3525	Yes
104	ZYX	ZYX	20520	-0.059	-0.3461	Yes
105	PLEKHF1	PLEKHF1	20606	-0.061	-0.3396	Yes
106	RRAS	RRAS	20702	-0.064	-0.3331	Yes
107	SLC25A37	SLC25A37	20764	-0.065	-0.3247	Yes
108	FGFRL1	FGFRL1	20784	-0.066	-0.3143	Yes
109	SERPINH1	SERPINH1	20869	-0.068	-0.3065	Yes
110	MMP14	MMP14	20926	-0.070	-0.2970	Yes
111	EHD2	EHD2	20980	-0.072	-0.2871	Yes
112	TIMP1	TIMP1	21029	-0.074	-0.2766	Yes
113	S100A11	S100A11	21047	-0.075	-0.2646	Yes
114	EFNB2	EFNB2	21255	-0.087	-0.2592	Yes
115	PAPPA	PAPPA	21297	-0.090	-0.2456	Yes
116	PDLIM4	PDLIM4	21316	-0.092	-0.2305	Yes
117	SLC22A18	SLC22A18	21336	-0.096	-0.2150	Yes
118	LIF	LIF	21404	-0.105	-0.2000	Yes
119	SPOCD1	SPOCD1	21473	-0.118	-0.1828	Yes
120	PLAU	PLAU	21507	-0.141	-0.1601	Yes
121	EMP1	EMP1	21515	-0.145	-0.1356	Yes
122	SERPINE1	SERPINE1	21554	-0.173	-0.1075	Yes
123	CHI3L1	CHI3L1	21572	-0.194	-0.0750	Yes
124	ITGA3	ITGA3	21577	-0.205	-0.0399	Yes
125	METTL7B	METTL7B	21587	-0.236	0.0004	Yes