DatasetNF1_GRD_exprs.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl_repos
PhenotypeNF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in classGRD
GeneSetNEFTEL_NPC2_2019
Enrichment Score (ES)0.45557898
Normalized Enrichment Score (NES)1.6110197
Nominal p-value0.01
FDR q-value0.010855442
FWER p-Value0.065
Table: GSEA Results Summary



Fig 1: Enrichment plot: NEFTEL_NPC2_2019   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MIATMIAT690.1420.0805Yes
2ENO2ENO22220.0970.1305Yes
3FNBP1LFNBP1L3230.0880.1781Yes
4MAP1BMAP1B3660.0840.2260Yes
5NDRG4NDRG48110.0650.2441Yes
6CEP170CEP17010580.0590.2678Yes
7STMN1STMN113300.0540.2871Yes
8NFIXNFIX13460.0540.3180Yes
9DPYSL3DPYSL313540.0530.3492Yes
10STMN4STMN415600.0500.3695Yes
11DBN1DBN118520.0460.3834Yes
12HN1HN119660.0450.4048Yes
13UCHL1UCHL121260.0430.4229Yes
14CRABP1CRABP123900.0400.4345Yes
15BLCAPBLCAP27390.0370.4404Yes
16TUBB2ATUBB2A34280.0320.4274Yes
17PKIAPKIA35460.0310.4404Yes
18TUBB3TUBB336230.0310.4550Yes
19DLX5DLX542880.0260.4398Yes
20TCF4TCF445300.0250.4435Yes
21NFIBNFIB45860.0250.4556Yes
22KIF5CKIF5C53430.0210.4328No
23SOX11SOX1157680.0190.4242No
24DPYSL5DPYSL565210.0150.3985No
25STMN2STMN268930.0140.3894No
26MLLT11MLLT1180920.0090.3393No
27SEPT3SEPT384190.0080.3289No
28HMP19HMP1993040.0050.2908No
29KIF5AKIF5A97800.0030.2706No
30SNAP25SNAP2512165-0.0050.1630No
31CD24CD2412357-0.0060.1577No
32DCXDCX12388-0.0060.1598No
33SOX4SOX413444-0.0100.1167No
34DYNC1I1DYNC1I116423-0.022-0.0082No
35DDAH2DDAH217039-0.025-0.0217No
36ELAVL4ELAVL417794-0.030-0.0392No
37CD200CD20018083-0.031-0.0340No
38IGFBPL1IGFBPL118280-0.033-0.0237No
39GNG3GNG318848-0.037-0.0280No
40PAK3PAK318892-0.038-0.0077No
41LBHLBH20190-0.053-0.0369No
42RND3RND320239-0.053-0.0075No
43ATP1B1ATP1B120422-0.0570.0175No
44TAGLN3TAGLN320667-0.0620.0431No
Table: GSEA details [plain text format]



Fig 2: NEFTEL_NPC2_2019   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NEFTEL_NPC2_2019: Random ES distribution   
Gene set null distribution of ES for NEFTEL_NPC2_2019