DatasetNF1_GRD_exprs.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl_repos
PhenotypeNF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in classGRD
GeneSetNEFTEL_NPC1_2019
Enrichment Score (ES)0.48781687
Normalized Enrichment Score (NES)1.7288727
Nominal p-value0.007905139
FDR q-value0.0046717934
FWER p-Value0.021
Table: GSEA Results Summary



Fig 1: Enrichment plot: NEFTEL_NPC1_2019   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MAP2MAP21450.1080.0576Yes
2SEZ6LSEZ6L2280.0960.1110Yes
3NXPH1NXPH12530.0940.1655Yes
4ABATABAT8060.0660.1788Yes
5FXYD6FXYD68920.0630.2123Yes
6GPR56GPR5610190.0600.2422Yes
7TCF12TCF1211950.0570.2677Yes
8STMN1STMN113300.0540.2935Yes
9MARCKSL1MARCKSL115000.0510.3160Yes
10HIP1HIP115370.0510.3444Yes
11OLIG1OLIG115820.0500.3722Yes
12TSPAN13TSPAN1316960.0490.3958Yes
13DBN1DBN118520.0460.4161Yes
14HN1HN119660.0450.4377Yes
15SCG3SCG324870.0390.4369Yes
16MYT1MYT130530.0350.4315Yes
17TNRTNR31790.0340.4457Yes
18TUBB3TUBB336230.0310.4434Yes
19TUBA1ATUBA1A36340.0310.4611Yes
20SERINC5SERINC538060.0290.4706Yes
21GLCCI1GLCCI144700.0250.4550Yes
22PTPRSPTPRS46340.0240.4619Yes
23LMF1LMF146860.0240.4739Yes
24PFN2PFN246940.0240.4878Yes
25BCANBCAN53830.0210.4681No
26SOX11SOX1157680.0190.4615No
27CHD7CHD760150.0180.4605No
28NPPANPPA77710.0110.3854No
29AMOTL2AMOTL279000.0100.3854No
30MLLT11MLLT1180920.0090.3820No
31BTG2BTG287890.0070.3536No
32MESTMEST94400.0040.3261No
33ASCL1ASCL1102710.0010.2883No
34LRRN1LRRN111449-0.0030.2354No
35BEX1BEX112138-0.0050.2065No
36CD24CD2412357-0.0060.1999No
37DCXDCX12388-0.0060.2021No
38HES6HES612547-0.0070.1986No
39DLL1DLL112760-0.0070.1932No
40SOX4SOX413444-0.0100.1673No
41SHDSHD14332-0.0130.1341No
42DLL3DLL314605-0.0140.1300No
43NEU4NEU416227-0.0220.0675No
44ELMO1ELMO117786-0.0300.0128No
45ELAVL4ELAVL417794-0.0300.0300No
46ETV1ETV118514-0.0350.0172No
47SEZ6SEZ618974-0.0380.0188No
48PCBP4PCBP420027-0.050-0.0002No
49GRIK2GRIK220588-0.0600.0096No
50TAGLN3TAGLN320667-0.0620.0431No
Table: GSEA details [plain text format]



Fig 2: NEFTEL_NPC1_2019   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NEFTEL_NPC1_2019: Random ES distribution   
Gene set null distribution of ES for NEFTEL_NPC1_2019