DatasetNF1_GRD_exprs.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl.NF1_GRD_phenotype.cls
#GRD_versus_Ctrl_repos
PhenotypeNF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in classGRD
GeneSetNEFTEL_MES2_2019
Enrichment Score (ES)0.473447
Normalized Enrichment Score (NES)1.6622528
Nominal p-value0.004149378
FDR q-value0.008401492
FWER p-Value0.043
Table: GSEA Results Summary



Fig 1: Enrichment plot: NEFTEL_MES2_2019   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ANXA2ANXA2410.1640.0461Yes
2BNIP3LBNIP3L600.1440.0876Yes
3ERO1LERO1L700.1400.1285Yes
4P4HA1P4HA1800.1350.1677Yes
5SLC6A6SLC6A61130.1170.2006Yes
6INSIG2INSIG21520.1070.2304Yes
7PLOD2PLOD21570.1070.2616Yes
8CA9CA91910.1010.2898Yes
9ENO2ENO22220.0970.3168Yes
10NAMPTNAMPT4330.0810.3308Yes
11PPP1R15APPP1R15A4770.0790.3519Yes
12ADMADM5330.0760.3718Yes
13SLC2A1SLC2A15410.0760.3937Yes
14BNIP3BNIP36200.0720.4112Yes
15PGK1PGK18970.0630.4169Yes
16SLC2A3SLC2A39770.0610.4312Yes
17ANGPTL4ANGPTL412890.0550.4328Yes
18VIMVIM15460.0510.4358Yes
19AKAP12AKAP1215670.0500.4496Yes
20UFM1UFM116750.0490.4590Yes
21EPAS1EPAS117530.0480.4694Yes
22DNAJB9DNAJB919540.0450.4734Yes
23LGALS3LGALS323180.0410.4686No
24EGLN3EGLN325260.0390.4705No
25GBE1GBE127600.0370.4706No
26PFKPPFKP37010.0300.4359No
27XPOTXPOT46300.0240.4000No
28LDHALDHA52020.0220.3798No
29NRN1NRN165400.0150.3223No
30HSPA5HSPA594220.0040.1899No
31FTLFTL95430.0040.1855No
32SLC39A14SLC39A1410792-0.0000.1277No
33ATF3ATF311356-0.0020.1023No
34GOLT1BGOLT1B11639-0.0030.0902No
35TRAM1TRAM113353-0.0100.0135No
36HERPUD1HERPUD114200-0.013-0.0220No
37HSPA9HSPA916238-0.022-0.1102No
38RPL21RPL2117015-0.025-0.1388No
39IGFBP3IGFBP319998-0.050-0.2625No
40SQSTM1SQSTM120653-0.062-0.2747No
41DDIT3DDIT320728-0.064-0.2593No
42ASNSASNS20893-0.069-0.2465No
43CDKN1ACDKN1A20989-0.072-0.2297No
44SERTAD1SERTAD121172-0.081-0.2142No
45MT1XMT1X21257-0.087-0.1925No
46WARSWARS21449-0.112-0.1684No
47NDRG1NDRG121524-0.149-0.1280No
48TRIB3TRIB321564-0.183-0.0760No
49GDF15GDF1521592-0.2630.0001No
Table: GSEA details [plain text format]



Fig 2: NEFTEL_MES2_2019   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NEFTEL_MES2_2019: Random ES distribution   
Gene set null distribution of ES for NEFTEL_MES2_2019