Details for gene set PHILLIPS

Table: GSEA Results Summary

Dataset	NF1_GRD_exprs.NF1_GRD_phenotype.cls #GRD_versus_Ctrl.NF1_GRD_phenotype.cls #GRD_versus_Ctrl_repos
Phenotype	NF1_GRD_phenotype.cls#GRD_versus_Ctrl_repos
Upregulated in class	GRD
GeneSet	PHILLIPS_PN
Enrichment Score (ES)	0.28656027
Normalized Enrichment Score (NES)	1.3207374
Nominal p-value	0.01968504
FDR q-value	0.10328501
FWER p-Value	0.259

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NTRK2	NTRK2	14	0.225	0.0274	Yes
2	GRIA2	GRIA2	27	0.178	0.0491	Yes
3	HEY2	HEY2	45	0.155	0.0677	Yes
4	PCSK1N	PCSK1N	67	0.142	0.0844	Yes
5	TPM1	TPM1	120	0.116	0.0964	Yes
6	TMEM100	TMEM100	139	0.110	0.1094	Yes
7	RTN1	RTN1	141	0.110	0.1230	Yes
8	SNRPN	SNRPN	196	0.100	0.1330	Yes
9	SEZ6L	SEZ6L	228	0.096	0.1436	Yes
10	WNT7B	WNT7B	257	0.093	0.1539	Yes
11	TIMP4	TIMP4	300	0.090	0.1632	Yes
12	FBXO2	FBXO2	380	0.083	0.1699	Yes
13	GPRC5B	GPRC5B	412	0.082	0.1786	Yes
14	SLIT1	SLIT1	417	0.082	0.1887	Yes
15	SOX8	SOX8	446	0.080	0.1974	Yes
16	THRA	THRA	447	0.080	0.2074	Yes
17	GRIA1	GRIA1	461	0.080	0.2167	Yes
18	NCAM1	NCAM1	549	0.075	0.2220	Yes
19	ATP6V1G2	ATP6V1G2	568	0.074	0.2305	Yes
20	GAD1	GAD1	699	0.069	0.2330	Yes
21	TMEM59L	TMEM59L	704	0.069	0.2415	Yes
22	IL17D	IL17D	747	0.068	0.2480	Yes
23	GAB2	GAB2	865	0.064	0.2505	Yes
24	FXYD6	FXYD6	892	0.063	0.2571	Yes
25	SLITRK5	SLITRK5	1282	0.055	0.2458	Yes
26	NUMA1	NUMA1	1291	0.055	0.2522	Yes
27	B3GAT1	B3GAT1	1387	0.053	0.2544	Yes
28	CRYAB	CRYAB	1460	0.052	0.2574	Yes
29	RASSF4	RASSF4	1475	0.052	0.2632	Yes
30	OLIG1	OLIG1	1582	0.050	0.2645	Yes
31	TTYH1	TTYH1	1643	0.049	0.2678	Yes
32	CCNK	CCNK	1657	0.049	0.2733	Yes
33	FSD1	FSD1	1702	0.048	0.2773	Yes
34	ABLIM1	ABLIM1	1755	0.048	0.2809	Yes
35	NAP1L3	NAP1L3	1773	0.047	0.2860	Yes
36	PHYHIPL	PHYHIPL	1884	0.046	0.2866	Yes
37	ZDHHC22	ZDHHC22	2064	0.044	0.2837	No
38	GABBR2	GABBR2	2168	0.043	0.2842	No
39	SCG3	SCG3	2487	0.039	0.2742	No
40	RAC3	RAC3	2573	0.039	0.2751	No
41	LUZP2	LUZP2	2596	0.039	0.2789	No
42	PAR5	PAR5	2609	0.038	0.2831	No
43	KIF1A	KIF1A	2966	0.036	0.2709	No
44	TMOD2	TMOD2	2986	0.035	0.2744	No
45	IKZF5	IKZF5	3062	0.035	0.2753	No
46	DPP10	DPP10	3243	0.033	0.2710	No
47	C1QL1	C1QL1	3268	0.033	0.2740	No
48	FLRT1	FLRT1	3282	0.033	0.2775	No
49	PLCB1	PLCB1	3312	0.033	0.2803	No
50	DUSP26	DUSP26	3426	0.032	0.2790	No
51	KCNQ5	KCNQ5	3550	0.031	0.2771	No
52	F2	F2	3629	0.031	0.2773	No
53	KCNN3	KCNN3	3764	0.030	0.2747	No
54	RIPPLY2	RIPPLY2	3779	0.030	0.2778	No
55	HSPA12A	HSPA12A	3805	0.029	0.2802	No
56	EPB41L2	EPB41L2	3898	0.029	0.2795	No
57	CMTM5	CMTM5	4051	0.028	0.2759	No
58	WDR86	WDR86	4055	0.028	0.2792	No
59	ZNF488	ZNF488	4056	0.028	0.2827	No
60	GNAO1	GNAO1	4075	0.028	0.2853	No
61	C11orf2	C11orf2	4129	0.027	0.2863	No
62	psiTPTE22	psiTPTE22	4259	0.027	0.2836	No
63	LRRC4	LRRC4	4274	0.027	0.2862	No
64	GRID1	GRID1	4446	0.026	0.2814	No
65	CALCRL	CALCRL	4891	0.023	0.2635	No
66	SEC31B	SEC31B	5060	0.022	0.2584	No
67	C13orf15	C13orf15	5174	0.022	0.2558	No
68	BCAN	BCAN	5383	0.021	0.2487	No
69	JPH3	JPH3	5411	0.020	0.2500	No
70	RASL10A	RASL10A	5478	0.020	0.2494	No
71	SCD	SCD	5807	0.019	0.2364	No
72	FAM133A	FAM133A	6041	0.018	0.2277	No
73	CDR1	CDR1	6065	0.017	0.2288	No
74	ADCY2	ADCY2	6135	0.017	0.2277	No
75	SGCG	SGCG	6192	0.017	0.2272	No
76	MMP16	MMP16	6212	0.017	0.2284	No
77	FUT9	FUT9	6298	0.016	0.2265	No
78	AKR1C1	AKR1C1	6548	0.015	0.2167	No
79	OMG	OMG	6713	0.015	0.2109	No
80	NRSN1	NRSN1	6754	0.014	0.2108	No
81	CYFIP2	CYFIP2	6776	0.014	0.2116	No
82	SPHKAP	SPHKAP	6854	0.014	0.2098	No
83	FAM19A5	FAM19A5	7116	0.013	0.1992	No
84	KSR2	KSR2	7151	0.013	0.1992	No
85	NALCN	NALCN	7402	0.012	0.1890	No
86	PCSK6	PCSK6	7448	0.012	0.1883	No
87	FGF14	FGF14	7553	0.011	0.1849	No
88	RAB11FIP4	RAB11FIP4	8028	0.009	0.1639	No
89	SLITRK2	SLITRK2	8043	0.009	0.1644	No
90	PLEKHB1	PLEKHB1	8442	0.008	0.1468	No
91	MPPE1	MPPE1	8462	0.008	0.1469	No
92	HLF	HLF	8477	0.008	0.1472	No
93	ZC3H12B	ZC3H12B	8505	0.008	0.1469	No
94	P2RX7	P2RX7	8606	0.007	0.1431	No
95	ABLIM3	ABLIM3	8694	0.007	0.1400	No
96	SCN3A	SCN3A	8713	0.007	0.1400	No
97	NET1	NET1	8736	0.007	0.1398	No
98	OVOL1	OVOL1	8741	0.007	0.1405	No
99	PHACTR3	PHACTR3	8842	0.006	0.1366	No
100	PDK2	PDK2	9081	0.006	0.1262	No
101	FAM155A	FAM155A	9087	0.006	0.1267	No
102	SOX6	SOX6	9137	0.006	0.1251	No
103	RASGEF1C	RASGEF1C	9349	0.005	0.1158	No
104	HIP1R	HIP1R	9497	0.004	0.1094	No
105	REPS2	REPS2	9607	0.004	0.1048	No
106	FLJ16779	FLJ16779	9642	0.004	0.1036	No
107	RPRM	RPRM	9737	0.003	0.0996	No
108	KIF5A	KIF5A	9780	0.003	0.0981	No
109	TRIM31	TRIM31	9915	0.003	0.0921	No
110	ASCL1	ASCL1	10271	0.001	0.0757	No
111	EPHB1	EPHB1	10273	0.001	0.0758	No
112	SGSM1	SGSM1	10423	0.001	0.0689	No
113	CSMD3	CSMD3	10441	0.001	0.0682	No
114	P2RY13	P2RY13	10532	0.000	0.0641	No
115	PDK4	PDK4	10548	0.000	0.0634	No
116	NKAIN4	NKAIN4	10550	0.000	0.0634	No
117	MN1	MN1	10563	0.000	0.0629	No
118	BEND7	BEND7	10644	0.000	0.0592	No
119	GNAL	GNAL	10853	-0.001	0.0495	No
120	SORBS1	SORBS1	10911	-0.001	0.0469	No
121	PKNOX2	PKNOX2	11018	-0.001	0.0421	No
122	NTN4	NTN4	11035	-0.001	0.0415	No
123	MAPT	MAPT	11069	-0.001	0.0402	No
124	KCNB1	KCNB1	11153	-0.002	0.0365	No
125	FGF13	FGF13	11372	-0.002	0.0266	No
126	PRKCZ	PRKCZ	11556	-0.003	0.0184	No
127	DOK6	DOK6	11846	-0.004	0.0054	No
128	ARHGAP22	ARHGAP22	12000	-0.005	-0.0012	No
129	PSD	PSD	12036	-0.005	-0.0022	No
130	SORCS3	SORCS3	12038	-0.005	-0.0017	No
131	FGF12	FGF12	12435	-0.006	-0.0194	No
132	GRIA4	GRIA4	12459	-0.006	-0.0197	No
133	TMLHE	TMLHE	12478	-0.006	-0.0198	No
134	DTX4	DTX4	12548	-0.007	-0.0222	No
135	DLL1	DLL1	12760	-0.007	-0.0311	No
136	SMAD9	SMAD9	12940	-0.008	-0.0385	No
137	GABRA3	GABRA3	12970	-0.008	-0.0388	No
138	KLRC3	KLRC3	13100	-0.009	-0.0438	No
139	ASB13	ASB13	13194	-0.009	-0.0470	No
140	C12orf53	C12orf53	13561	-0.010	-0.0629	No
141	SNAP91	SNAP91	13591	-0.010	-0.0629	No
142	FERMT1	FERMT1	13596	-0.010	-0.0618	No
143	AJAP1	AJAP1	13934	-0.012	-0.0761	No
144	CRTC1	CRTC1	14224	-0.013	-0.0880	No
145	PDE2A	PDE2A	14236	-0.013	-0.0869	No
146	SHD	SHD	14332	-0.013	-0.0897	No
147	GABRB3	GABRB3	14334	-0.013	-0.0881	No
148	ZCCHC24	ZCCHC24	14458	-0.014	-0.0921	No
149	DLL3	DLL3	14605	-0.014	-0.0972	No
150	CNTN3	CNTN3	14740	-0.015	-0.1016	No
151	GABBR1	GABBR1	14827	-0.015	-0.1037	No
152	KCTD4	KCTD4	14935	-0.016	-0.1067	No
153	ATRNL1	ATRNL1	15040	-0.016	-0.1096	No
154	NDRG2	NDRG2	15120	-0.017	-0.1112	No
155	DSCAML1	DSCAML1	15376	-0.018	-0.1209	No
156	ID4	ID4	15399	-0.018	-0.1198	No
157	RGS9	RGS9	15474	-0.018	-0.1210	No
158	KIF21B	KIF21B	15568	-0.018	-0.1230	No
159	GPR158	GPR158	15705	-0.019	-0.1270	No
160	MCF2	MCF2	15808	-0.020	-0.1293	No
161	RUNDC3A	RUNDC3A	16030	-0.021	-0.1371	No
162	NEU4	NEU4	16227	-0.022	-0.1436	No
163	FBXL15	FBXL15	16286	-0.022	-0.1436	No
164	GLUD1	GLUD1	16502	-0.023	-0.1508	No
165	STOX1	STOX1	16589	-0.023	-0.1519	No
166	GFRA1	GFRA1	16618	-0.023	-0.1503	No
167	TPCN2	TPCN2	16788	-0.024	-0.1552	No
168	RIMS2	RIMS2	17201	-0.026	-0.1712	No
169	TAL1	TAL1	17243	-0.027	-0.1698	No
170	AP2B1	AP2B1	17307	-0.027	-0.1694	No
171	RPL13	RPL13	17362	-0.027	-0.1685	No
172	ELMO1	ELMO1	17786	-0.030	-0.1846	No
173	USH1C	USH1C	17846	-0.030	-0.1837	No
174	CNTN1	CNTN1	17931	-0.031	-0.1838	No
175	GLUD2	GLUD2	17976	-0.031	-0.1820	No
176	JPH4	JPH4	18046	-0.031	-0.1814	No
177	GGTA1	GGTA1	18047	-0.031	-0.1775	No
178	NRG3	NRG3	18101	-0.032	-0.1760	No
179	SLC25A21	SLC25A21	18124	-0.032	-0.1731	No
180	RPL37	RPL37	18247	-0.033	-0.1747	No
181	PID1	PID1	18259	-0.033	-0.1712	No
182	TNKS2	TNKS2	18264	-0.033	-0.1673	No
183	CBX7	CBX7	18278	-0.033	-0.1638	No
184	FSTL5	FSTL5	18308	-0.033	-0.1610	No
185	SMOC1	SMOC1	18310	-0.033	-0.1570	No
186	SSTR2	SSTR2	18316	-0.033	-0.1531	No
187	ACSM5	ACSM5	18397	-0.034	-0.1526	No
188	MAPK8IP2	MAPK8IP2	18423	-0.034	-0.1495	No
189	CSDC2	CSDC2	18464	-0.034	-0.1472	No
190	FRY	FRY	18585	-0.035	-0.1484	No
191	BMP2	BMP2	18843	-0.037	-0.1558	No
192	HDAC5	HDAC5	18847	-0.037	-0.1512	No
193	SH3GL2	SH3GL2	18995	-0.039	-0.1533	No
194	NOG	NOG	19054	-0.039	-0.1511	No
195	GRIK4	GRIK4	19077	-0.039	-0.1473	No
196	DNM3	DNM3	19167	-0.040	-0.1464	No
197	LGR5	LGR5	19567	-0.044	-0.1595	No
198	EFHA2	EFHA2	19707	-0.046	-0.1603	No
199	SLC1A1	SLC1A1	19759	-0.047	-0.1569	No
200	ALDH5A1	ALDH5A1	19835	-0.048	-0.1544	No
201	OLIG2	OLIG2	19896	-0.049	-0.1512	No
202	CALN1	CALN1	19946	-0.049	-0.1474	No
203	SSTR1	SSTR1	19990	-0.050	-0.1432	No
204	PKP4	PKP4	20046	-0.051	-0.1394	No
205	PARD3	PARD3	20063	-0.051	-0.1339	No
206	ENHO	ENHO	20124	-0.052	-0.1302	No
207	ANKS1B	ANKS1B	20262	-0.054	-0.1299	No
208	MAF	MAF	20429	-0.057	-0.1306	No
209	EHD3	EHD3	20493	-0.058	-0.1263	No
210	ZNF804A	ZNF804A	20595	-0.060	-0.1235	No
211	FAIM2	FAIM2	20666	-0.062	-0.1190	No
212	SUSD5	SUSD5	20697	-0.063	-0.1125	No
213	ARL3	ARL3	20721	-0.064	-0.1056	No
214	CECR6	CECR6	20795	-0.066	-0.1008	No
215	FAM110B	FAM110B	20872	-0.068	-0.0958	No
216	ALDOC	ALDOC	20972	-0.072	-0.0915	No
217	DSCAM	DSCAM	20996	-0.073	-0.0835	No
218	DNAJC12	DNAJC12	21017	-0.073	-0.0753	No
219	OPCML	OPCML	21056	-0.075	-0.0677	No
220	PTGDS	PTGDS	21153	-0.080	-0.0622	No
221	HS3ST4	HS3ST4	21265	-0.088	-0.0565	No
222	ABHD6	ABHD6	21294	-0.090	-0.0466	No
223	SLC1A4	SLC1A4	21329	-0.095	-0.0363	No
224	GALNT13	GALNT13	21474	-0.119	-0.0283	No
225	APOE	APOE	21593	-0.272	0.0001	No